Paraburkholderia acidiphila: FAZ97_04255
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Entry
FAZ97_04255 CDS
T07262
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03030
DNA replication
pacp03430
Mismatch repair
pacp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAZ97_04255 (dnaE)
03430 Mismatch repair
FAZ97_04255 (dnaE)
03440 Homologous recombination
FAZ97_04255 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacp03032
]
FAZ97_04255 (dnaE)
03400 DNA repair and recombination proteins [BR:
pacp03400
]
FAZ97_04255 (dnaE)
Enzymes [BR:
pacp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAZ97_04255 (dnaE)
DNA replication proteins [BR:
pacp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAZ97_04255 (dnaE)
DNA repair and recombination proteins [BR:
pacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAZ97_04255 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
QGZ54194
UniProt:
A0A7Z2G325
LinkDB
All DBs
Position
1:955559..959116
Genome browser
AA seq
1185 aa
AA seq
DB search
MTPMSDPRFVHLRVHSEFSIADGIVRLDDLVKAAAKDGQGALALTDLGNAFGLVRFYSEA
RGKGVKPIAGCDVWITNPDDRDKPSRLLLLVKDKRGYLNLCELLSKAWLTNQYRGRAEVD
VAWLEAGLAEGLLAISGAQQGDVGLALAAGNAESAKRHAQRWAKLFPNAYYIELQRCGQP
GGEQYVEQAVALASQLKLPVVATHPMQFMTDEEYTAHEARVCISEGDILANPRRQKRFTT
DQRFRTQEEMAALFADIPSAIANTIEIAKRCNLTLELGKPKLPLFPTPDGMSLDDYLVQL
SREGLEKRLVQLYPNEAEREQERARYNERLEFECGTIIKMGFPGYFLIVADFINWAKNNG
VPVGPGRGSGAGSLVAYALGITDLDPLRYNLLFERFLNPERVSMPDFDIDFCQHGRDRVI
QYVKEKYGADAVSQIATFGTMAAKAAVRDIGRVLDLGYNFTDGVAKLIPFKPGKHVTIAD
AMKEEPLLQERYDNEDEVHQLLDLAQLVEGLTRNVGMHAGGVLIAPGKLTDFCPLYTQGD
ESGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDWAERYIRMLDPSKQDWSLAQVPLDDAP
SFQILKKANTVAVFQLESRGMQGMLKDAQPDRFEDIIALVALYRPGPMDLIPSFCARKHG
REVVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKKKPEEMAK
HREIFAEGAAKNGLTREKADETFDLMEKFAGYGFNKSHAAAYALLAYHTAWLKAHHPAEF
MAANMSLAMDDTDKVKILFEDCLTNKMAVLPPDVNASAYRFEPVADANVAEGKRSRTIRY
GLGAIKGSGQNAIEEILRAREEGGPFKDLFDFCERIDRRLVNRRTVEAMIRAGAFDTIHA
NRAQLLASVPMAMEAADQASANAMQAGLFDMGDAPLAAHELVDEPAWGEKRKLQEEKAAL
GFYLSGHLFDAYKDEVRRFVRQKIGELKEGRDKLIAGVIASLRTQMTQRGKMLIALLDDG
SGQCEVTVFNEQFEAHKALFKEDELLVVQGGARNDAFTGGIRFTVDTVMDLERARSRYAQ
AVKLQMNGNANAGALRTVLEAYRAKPDDSLPAPAAQARGRGGFGRDRGERAQAVIPNGLA
VQIAYRNDRAEGEVRLGDAWRVKPSDDLLAALRGEFAGSEIEIVY
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccatgtcagatccccgcttcgtccatctccgcgtccattccgaattctcgatt
gccgacggcatcgtgcgcctcgacgacctcgtcaaggcggccgccaaagacggccagggc
gcgctcgcgctcaccgacctcggcaacgcattcggcctcgtccgtttctacagcgaagcg
cgcggcaaaggggtcaaacccattgccggctgcgacgtctggatcacgaatcccgacgac
cgcgacaagccgtcgcgcctgctgctgctggtgaaggacaagcgcggctatttgaatctg
tgcgagctgctgtccaaggcgtggctcacgaaccagtatcgcggccgcgcggaagtcgac
gttgcatggctcgaagcaggtctggccgagggcctgcttgcgatctcgggcgcgcaacag
ggcgacgtgggtctcgcactcgcggcgggcaatgccgaaagcgcgaagcgccatgcgcag
cgctgggcgaagctgtttccgaacgcgtattacatcgagctgcagcgctgcgggcagccc
ggcggcgagcagtatgtcgagcaggccgtcgcgctcgcgtcgcaactgaagctgccggtg
gtcgccacgcaccccatgcagttcatgaccgacgaggaatacaccgcgcacgaagcgcgc
gtgtgcatctcggaaggcgacatcctcgcgaatccgcgccgccagaagcgtttcacgacc
gatcaacgttttcgcacgcaggaagaaatggccgcgctgttcgcggacattccgtcggcc
attgcgaacacgatcgaaatcgccaagcgctgcaatctcacgctcgaactcggcaagccg
aagctgccgctcttcccgacgcccgacggcatgtcgctcgacgactatctcgtgcagctt
tcgcgagaaggcctcgaaaagcgccttgtgcagctgtatcccaatgaagccgaacgcgag
caggagcgtgcgcgctacaacgagcggctcgaattcgagtgcggaaccatcatcaagatg
ggcttcccgggctacttcctgatcgttgcggacttcattaactgggcgaagaacaacggc
gtgccggtgggccctggccggggttcgggcgcgggctcgctcgtcgcctacgcgctcggc
attaccgacctcgatccgctgcgctacaacctgctgttcgagcgcttcctgaatccggaa
cgcgtgtcgatgcccgacttcgacatcgacttctgccagcacgggcgcgaccgcgtcatt
caatacgtgaaggagaagtacggcgccgacgcggtgtcgcagatcgcgaccttcggcacg
atggccgcgaaggcggccgtgcgtgacatcggccgcgtgctcgacctcggctacaacttc
accgacggcgtggccaagctcattccgttcaagcccggcaagcacgtcacgattgccgat
gcgatgaaggaagagccgctcctgcaggagcgctacgacaacgaagacgaagtgcaccag
ctgctcgacctcgcgcagctcgtggaaggtctcacgcgtaacgtgggcatgcacgcgggc
ggcgtgctgatcgcgcccggcaagctgacggatttttgcccgctctacacgcagggcgac
gaaagcggcgtcgtgagccagtacgacaaggacgacgtggaagccgtcggcctcgtgaag
ttcgactttctgggcctgaccacgctcacgattctcgactgggccgagcgctatatccgc
atgctcgatccgtcgaagcaagactggtcgctcgcgcaggtgccgctcgacgacgcgccg
tcgttccagatcctcaagaaggccaacacggtcgccgtgttccagctggaaagccgcggc
atgcagggcatgctgaaggacgcgcagcccgaccgcttcgaggacatcatcgcgctcgtg
gcgttgtaccgtccgggtccgatggacctgatcccgagcttctgcgcgcgtaagcacggc
cgcgaagtggtggagtaccccgatccgcgcgtcgaacctgtcctgaaagagacctacggc
atcatggtctaccaggagcaggtgatgcagatggcgcagatcatcggcgggtactcgctt
ggcggcgctgacttgctgcgccgtgcgatgggtaagaagaagcccgaggaaatggccaag
caccgcgaaattttcgcggaaggcgcggcgaagaacggcctcacgcgcgagaaagccgac
gaaaccttcgacttgatggagaagttcgcgggctacggcttcaacaagtcgcacgcggcc
gcttatgcgctgctcgcgtatcacacggcgtggctcaaggcgcaccatccggcggaattc
atggcggcgaatatgtcgctcgccatggacgacaccgacaaggtgaagatcctcttcgag
gactgcctgaccaacaagatggccgtgctgccgccggacgtgaacgcttcggcgtatcgc
ttcgagccggtggccgatgcgaacgtcgcggaaggcaagcgctcgcgcacgatccgctac
ggtctgggcgcgatcaagggcagcggccagaacgccatcgaagaaatcttgcgcgcgcgc
gaggagggcggtcccttcaaggacctgttcgacttctgcgagcgtatcgaccgtcgcctt
gtgaatcgccgcacagtcgaagcgatgatccgcgccggggcattcgacacgatccacgca
aaccgcgcgcagttgctcgcctccgtgccaatggcgatggaagccgccgaccaggcgagc
gccaacgcgatgcaggcgggcctcttcgacatgggcgacgcgccgcttgctgctcacgaa
ctggtcgacgaacccgcgtggggcgagaagcgcaagcttcaggaagagaaggccgcgctc
ggcttctatctctcggggcacctcttcgacgcctacaaggacgaagtgcgccgcttcgtg
cgccagaagatcggcgagttgaaggaagggcgcgacaagctgatcgcgggcgtgatcgct
tcattgcgcacgcaaatgacgcaacgcggcaagatgctgatcgcgctgctcgacgacggc
agcggccagtgcgaagtgacggtgttcaacgagcagttcgaagcgcacaaggcgctcttc
aaggaagacgagctgctcgtcgtgcagggcggtgcgcgcaatgacgcattcacgggcggc
attcgctttaccgtcgatacggtcatggacctcgagcgcgcgcgcagtcgctacgcgcag
gccgtgaagctgcagatgaacggcaacgccaatgccggtgcgctgcgcacggtgctcgaa
gcgtatcgcgcgaagcccgacgactcgctgccggcgccggccgcgcaagcgcgtggccgc
ggcggcttcgggcgcgatcgcggcgagcgcgcgcaagcggtcatcccgaacggactcgcg
gtgcagattgcctaccgcaacgatcgggccgaaggcgaagtacgtctgggcgacgcctgg
cgcgtcaagccctccgacgatctgctcgccgcactgcgcggcgagtttgcgggcagtgag
atcgagatcgtttattga
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integrated database retrieval system
