Paraburkholderia acidiphila: FAZ97_04540
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Entry
FAZ97_04540 CDS
T07262
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAZ97_04540 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacp03019
]
FAZ97_04540 (pnp)
03016 Transfer RNA biogenesis [BR:
pacp03016
]
FAZ97_04540 (pnp)
Enzymes [BR:
pacp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FAZ97_04540 (pnp)
Messenger RNA biogenesis [BR:
pacp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAZ97_04540 (pnp)
Transfer RNA biogenesis [BR:
pacp03016
]
Prokaryotic type
tRNA degradation factors
FAZ97_04540 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
UPF0181
Motif
Other DBs
NCBI-ProteinID:
QGZ54244
UniProt:
A0A7Z2G3R6
LinkDB
All DBs
Position
1:1017414..1019558
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AA seq
714 aa
AA seq
DB search
MTMFNKVVKEFKWGQHNVRLETGEIARQASGAVIVDVEDTVVLATVVGAKTAKPGQDFFP
LTVDYIEKTYSAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGYYNEVQVVIHVL
SINPEVPADIPALIGASAALAISGLPFNGPVGAARVAYINNEYVLNPTRAQIKESRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVRDGGKPEWDWTPAPK
DEALIARVTAIANDSLLAAYQLRDKQQRSTKLKEVYAATSAKLEEEAAAAGTTAADKATV
GNIVFDLEAKIVRSQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALVA
CLPSAEEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEAGVTALQMDIKIQGITKEIMQVALAQAKEGRMHI
LGKMTSAVSGVNTELSAYAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITAEIEVGQVYEGAVLKLLDFGAIVNLLPGKDGLLHISE
IANERIKDINDYLKEGQIVKVKVIQTDEKGRVRLSAKALLNEQAGGAPQGEPQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgttcaataaagtcgtgaaggaattcaaatggggccagcacaacgtgcgcctc
gaaacgggtgagatcgcccgtcaggccagcggtgctgtcatcgtcgacgtcgaagacacc
gtcgtgctcgcgaccgttgtcggcgcgaagaccgccaagccgggtcaggacttcttcccg
ctcaccgtcgactacatcgaaaagacctattcggccggcaagatcccgggcggtttcttc
cgccgcgaaggccgtccgtcggaaggcgagacgctgatctcgcgcctgatcgaccgtccg
ctgcgtccgctgttcccggaaggctattacaacgaagtccaggtcgtgatccacgtcctg
tcgatcaacccggaagtcccggctgacatccccgcgctgatcggcgcgtcggctgcgctg
gccatctcgggtctgccgttcaacggcccggtcggcgccgcacgcgtggcctacatcaac
aacgagtacgtgctgaacccgacgcgcgcgcagatcaaggaatcgcgcctcgacctcgtg
gtggccggtaccgagcgtgccgtgctgatggtggaatcggaagccgaccagctgccggaa
gacgtgatgctcggcgcggtcgtgttcggccacgagcagatgcaaacggccatcgacgcg
atccacgaactggtgcgcgacggcggcaagcccgagtgggactggacgccggcgccgaag
gacgaagcgctcatcgcgcgcgtcacggctatcgccaacgacagcctgctcgccgcgtac
cagctgcgcgacaagcaacaacgctcgaccaagctgaaggaagtctacgcagccacgtcg
gccaagctcgaagaagaagcggctgcggccggcacgacggcggccgacaaggccacggtc
ggcaacatcgtgttcgacctcgaagcgaagatcgtccgctcgcagatcctgaacggcgag
ccgcgtatcgacggccgcgacacgcgcaccgtgcgtccgatcgagatccgcacgggcgtc
ctgccgcgcacccacggttcggcgctgttcacgcgcggcgaaacgcaggcgctggtcgtg
gcgacgctcggcaccaagggcgacgagcagatcatcgacgcgctcgaaggcgagtaccgc
gaccgcttcatgctccactacaacatgcccccgttcgcgaccggcgaaacgggccgtgtt
ggctcgcccaagcgccgtgaaatcggccacggccgtctcgcgaagcgcgcgctcgtcgcg
tgcctgccgagcgccgaagagttcggctactcgatccgcgtggtctcggaaatcaccgag
tcgaacggttcgtcgtcgatggcttcggtgtgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgcgggtatcgcgatgggcctgatcctcgaaggcaac
aagttcgccgtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggcgggtacggaagctggcgtgaccgcgctgcagatggacatcaagatccagggc
atcacgaaggaaatcatgcaggtcgccctcgcgcaagcgaaggaaggccgtatgcacatc
ctcggcaagatgacctcggcggtgtcgggcgtgaacacggagctgtcggcttacgctccg
cgcatgatcaccatcaagatcaacccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaaccggcacgacgatcgacatttcggacgacggc
gtcgtgaccatcgcttcgacgtcgagcgaaggcatggccgaagcgaagaagcgcatcgag
aacatcacggccgaaatcgaagtgggccaggtgtacgaaggcgcggttctcaagctgctg
gacttcggcgcgatcgtgaacctgctgccgggcaaggatggtctgctgcacatctccgag
atcgccaacgagcgtatcaaggacatcaacgactatctgaaggaaggccagatcgtgaag
gtcaaggtcatccagacggacgagaagggccgcgtgcgcctgtccgccaaggcgctgctc
aacgagcaagcgggtggcgcaccgcagggcgagccgcagcagtaa
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