KEGG   Paraburkholderia acidiphila: FAZ97_05050
Entry
FAZ97_05050       CDS       T07262                                 
Name
(GenBank) AAA family ATPase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
pacp  Paraburkholderia acidiphila
Pathway
pacp03420  Nucleotide excision repair
pacp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pacp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FAZ97_05050
   03430 Mismatch repair
    FAZ97_05050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pacp03400]
    FAZ97_05050
Enzymes [BR:pacp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FAZ97_05050
DNA repair and recombination proteins [BR:pacp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FAZ97_05050
   MMR (mismatch excision repair)
    Other MMR factors
     FAZ97_05050
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 PcrA_UvrD_tudor AAA_12 Viral_helicase1 AAA_30 AAA_11 DUF8203
Other DBs
NCBI-ProteinID: QGZ54337
UniProt: A0A7Z2J7A0
LinkDB
Position
1:1125702..1128107
AA seq 801 aa
MPELLANLNPEQLAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGMASPSTILAVTF
TNKAAREMTARLQAMMPIDTRGMWIGTFHGLCNRMLRAHFRDAGLPQTFQILDTADQLSA
IKRLMKGLNVDDEKYPPKNLQYFINNAKEQGLRPKDVDVSDDFNRKFVELYEAYDQQCQR
EGVVDFAELLLRCYELLAYNPPLRAHYQGRFRDILVDEFQDTNKLQYAWLKLLAGPGNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVKHMIKLEQNYRSHGHILDAANYLIAHNSRR
LGKNLRTDAGHGEPVRVYEAATDSQEAGWIVEEIRALINQGLARHEIAILYRSNAQSRTI
EHTLVNAGVPYKVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVTGKAGTSLGSFANLVAKMRAETAQMSLPETVEYTVRMSG
LAEFYQTEREGQDRLENLQELVTAATAFVSEAGYGLDTPARSIPLRPGASAVPEIVSQDG
EIEVLDAPTITDPAQNPDVMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSAMEADGLEEERRLMYVAITRAKERLYISFAQSRLLHGQTRYNV
RSRFFDELPQESLKWLTPKVEAGSRWGGRSDNAGWGRDWFARPGGGEGGNGGGNGGGNYG
GGRRERDAYIADKSPAPAFANAQRAAETGFRVGQGVFHTKFGEGTITALEGSGTDAKAQV
RFKRHGEKWLALAVAKLQPVE
NT seq 2406 nt   +upstreamnt  +downstreamnt
atgcccgaactgctcgcgaacctgaaccccgaacaactcgccgccgtcacgttgcccaac
gaaccggcgctcattctggccggggccggcagcggcaagacgcgcgtgctgatcacccgc
attgcgtggctgatccagcagggcatggcgtcgccgtccaccatcctggccgtgaccttc
acgaacaaggccgcgcgcgaaatgacggcccgcctgcaggcgatgatgcccatcgacacg
cgcggcatgtggatcggcaccttccacggcctgtgcaaccgcatgctgcgcgcgcatttc
cgcgacgccggcctgccgcagaccttccagattctcgacacggccgaccagctctcggcc
atcaagcgtttgatgaagggtctgaacgtcgacgacgagaagtacccgccgaagaacctg
cagtacttcatcaacaacgcgaaggagcagggcctgcgtccgaaagacgtcgacgtgagc
gacgacttcaaccgcaagttcgtcgaactctacgaggcctacgatcagcagtgccagcgc
gaaggcgtagtggacttcgccgagctgctgctgcgctgctacgagctgctcgcgtacaac
ccgccgctgcgcgcgcactatcaggggcgctttcgcgacattctggtggacgagttccag
gacaccaacaagctccagtacgcatggctcaagctgctcgcggggccgggcaacgcgatc
ttcgcggtgggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtcggcaac
atgcgcgacttcgagaacgagttccgcgtgaagcacatgatcaagctggagcagaactac
cgttcgcacggccatattctcgatgcggccaactacctgatcgcgcataactcgcggcgt
ctgggcaagaacctgcgcaccgatgcgggccacggcgagccggtgcgcgtgtacgaggcg
gcgaccgattcgcaggaagcgggctggatcgtcgaggagattcgcgcgctcatcaaccag
gggctcgcgcgccacgagatcgccattctttaccgcagcaacgcgcagtcgcgcacgatc
gagcacacgctcgtgaacgcgggcgtgccgtacaaggtgtacggcggcctgcgcttcttc
gagcgtcaggaagtcaagcatgcgctcgcgtatctgcgcttgatcgacaatccgaacgac
gacacggcgtttgcgcgtgtcgtgaacttccccacgcgcggaattggcgcgcgctcgatc
gagcagctcgcggatgccgcgcgcctctacaactgctcgatggccgcggcgatcccttac
gtcacgggcaaggcgggcacgagcctcggttcgttcgccaatctggtcgcgaagatgcgc
gcggagacggcgcagatgagcctgccggaaaccgtcgaatacacggtgcgcatgagcggc
ctcgccgagttctatcagaccgagcgcgaaggccaggatcgcctggagaacttgcaggaa
ctcgtgactgcggccacggcgttcgtgagcgaggcgggctacggtctcgacacacccgcg
cgctcgattccgctgcgcccgggggcgagcgcggtacccgagatcgtctcgcaggacggc
gagatcgaagtgctcgacgcgcccacgatcacggaccccgcgcagaaccccgacgtcatg
acgccgcttgcgggcttcctctcgcatgcctcgctcgaagccggcgacaaccaggcgcag
gcgggccaggacgccgtgcagctgatgacggtgcacgccgcgaagggcctcgaattcacg
gcggtcttcatcaccggtctcgaagagggcttgttcccgcacgagaacagcgcgatggaa
gccgacggcctcgaagaagagcgccgcctgatgtacgtggcgatcacgcgcgcgaaggag
cggctttacatctcgtttgcgcagagccgcttgctgcatggccagacgcgctacaacgtg
cgctcgcgctttttcgacgaactgccgcaggagtcgctcaagtggctcacgcccaaggtc
gaggcgggttcacgttggggcggacgttccgacaacgcaggctggggccgcgactggttc
gcacggccgggcggcggcgagggcggcaatggcggtggtaacggcggtggcaactacggc
ggcggccgccgcgagcgcgacgcctatatcgcggacaagagcccggcgcccgcgttcgcc
aacgcgcagcgcgcagccgaaacgggcttccgtgtggggcagggtgtgttccacacgaag
ttcggcgaaggcacgattacggcgctcgaaggcagcggcacagacgccaaggcgcaggtg
cgcttcaagcgccacggcgagaaatggctcgcgctggcggtcgccaagctgcagccggtg
gagtga

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