Paraburkholderia acidiphila: FAZ97_05320
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Entry
FAZ97_05320 CDS
T07262
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FAZ97_05320
09124 Replication and repair
03420 Nucleotide excision repair
FAZ97_05320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacp03021
]
FAZ97_05320
03036 Chromosome and associated proteins [BR:
pacp03036
]
FAZ97_05320
03400 DNA repair and recombination proteins [BR:
pacp03400
]
FAZ97_05320
Enzymes [BR:
pacp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
FAZ97_05320
Transcription machinery [BR:
pacp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FAZ97_05320
Chromosome and associated proteins [BR:
pacp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
FAZ97_05320
DNA repair and recombination proteins [BR:
pacp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FAZ97_05320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
FJX1_middle
Motif
Other DBs
NCBI-ProteinID:
QGZ54385
UniProt:
A0A7Z2G3P4
LinkDB
All DBs
Position
1:complement(1187350..1189641)
Genome browser
AA seq
763 aa
AA seq
DB search
MSYTVAVRTLCEFTAKRGDLDLRFTPSPDASDGRAGHAAIAARRPPGYETEIALSGTFES
LTVRGRADGYDPARRRLEEFKTYRGDLEAMRENQRALHWAQLRVYGALLCDTLGLDALEL
ALVYYDIGSGRETALVEQASASELRAAFETQCRRFVAWAEQESAHRTARDAALAALRLPH
PQFRAGQRDLAEAVWRAATQGRCLLAQAPTGIGKTIGTLFPQLKACPRAAIDKVVFLSAK
SSGRQLALDALATLTRAQDVTTADTQRTTMPLRVLELVARDKACEHPEAACHGESCVLAR
GFYDRLPAARAAALERLRLDRAALREVASEHVVCPYYLGQELARWSDVIVGDYNYWFDAS
AMLFMLAAHNQWRTSVLVDEAHNLPERARAMYSAELVQTRIDTVRLASSGPLKRALARLQ
KHWNAQNAIQPGAWRASDTLPEGLVAALGEVIGAIGDQLAEPALVRDPELERFYFDALHF
TRVAERFDTHSLFDVTPLVQQSARRPRSTIAIRNIVPADALRARIATAHSMTLFSATLSP
THYYNDMLGLPANTVSIDIDTPFRADQLDVHIARHISTRFKDRARSLEALVARVSAQYAE
RPGNYLCFFSSYEYLQQAADVFVARRPEVDVWLQSRTMDEAGQQAFVARFMEGGCGIGFA
VLGGAFGEGIDLPGTRLIGTFIATLGMPQVNALNEAMRARMDTLYGDGFDYTYLIPGLRK
VVQAAGRVIRTEHDRGVVHLLDDRFAQPGVRALLPAWWRIASS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaccgtcgccgtacgcacgctgtgcgagttcaccgccaagcgcggcgatctc
gacctgcgcttcacgccctcgcccgacgcaagcgatggccgcgccggccacgcggccatc
gccgcccgacggccgcccggctacgagaccgagatcgcgctttccggcacgttcgaatcg
ctcaccgtgcgcggccgcgcggacggctacgatcccgcgcggcgcaggctcgaagaattc
aagacctatcgcggcgacctcgaagcgatgcgcgaaaatcagcgcgcgcttcactgggca
cagttgcgcgtctacggcgcactgctgtgcgacacgctcgggctcgatgcgctcgaactc
gccctggtgtactacgacatcggttcgggccgcgagacagcgctcgtcgagcaggcgagc
gcgtcggaactgcgcgccgcgttcgaaacgcaatgccgccgcttcgtcgcatgggccgag
caggaaagcgcgcaccgcaccgcgcgcgatgccgcgctcgccgccctgcgcttgccgcac
ccgcaatttcgcgccggccagcgcgatctcgccgaagccgtctggcgcgcggcgacgcag
gggcgctgtctgctcgcgcaagcgcccaccggcatcggcaagaccatcggcacgctcttt
ccgcagttgaaggcttgcccacgcgcggccatcgacaaggtcgtatttctgagcgcgaaa
agctcaggccgccagttggcgctcgatgcgctcgccacgctgacacgcgcgcaagacgtt
accaccgccgatacccaacgaacgaccatgccgttgcgagtgctcgaactcgttgcgcgc
gacaaggcttgcgaacaccccgaagcggcctgtcacggcgaatcctgcgtgctcgcgcgc
ggcttctacgaccgcctgccggccgcgcgcgcggcggcgctcgaacgcctgcggctcgat
cgcgcagcactgcgcgaagtggcgagcgagcacgtcgtctgcccttactaccttggccag
gaactggcgcgctggagcgacgtgatcgtcggcgactataactactggttcgacgcgagc
gccatgctgttcatgctcgccgcgcacaaccagtggcgcacgagcgtgctcgtggacgag
gcgcacaacctgcccgagcgcgctcgcgcgatgtactcggcggaactcgtgcaaacgcgc
atcgacaccgtgcgcctcgcctcgagcgggccgctcaagcgcgcgctcgcgcgcctgcag
aagcactggaatgcgcaaaacgccatacaacccggcgcctggcgcgcgagcgacaccttg
cccgaaggcctcgtcgcggctctcggcgaagtgatcggcgcaattggcgaccaactcgcc
gaacccgcgctcgtacgcgaccccgaactcgagcgcttctatttcgacgccctgcatttc
acgcgcgttgccgagcgcttcgatacccattcgctcttcgacgtcacgccccttgtgcag
cagagcgctcgccgcccgcgttcgaccatcgcgatccgcaacatcgtgccggcggacgcc
ttgcgcgcgcgcatcgccaccgcgcacagcatgacgctcttttccgcgacgctctcgccc
acgcattactacaacgacatgctcggcctgcccgccaacacggtgagcatcgacatcgat
acgccgtttcgcgcggaccagctcgacgtacacatcgcccgccacatctcgacgcgtttc
aaggaccgcgcacgctcgctcgaagcgctggttgcgcgcgtgtcggctcaatatgccgag
cgccccggcaactatctttgtttcttcagcagctatgagtatctgcagcaagccgccgac
gtgttcgtggctcgccgccctgaggtggacgtgtggctgcagtcgcgcaccatggacgaa
gcgggccaacaggccttcgtcgcgcgcttcatggaaggcggctgtggcattggcttcgcg
gtgctggggggcgcgttcggcgaaggcatcgatctgccgggcacgcgcctcatcggcacc
ttcatcgccacgctcggcatgccccaggtgaacgccctgaacgaggcgatgcgcgcgcgc
atggatacgctttacggcgatggcttcgactacacgtacctgatcccgggcttgcgcaag
gtcgtgcaagccgctggccgcgtgatccgcaccgaacacgatcgcggcgtcgtgcacctg
ctggacgaccgcttcgcgcagcccggggtgcgtgcgttgttgcccgcgtggtggcgtatc
gcctccagttga
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