Paraburkholderia acidiphila: FAZ97_05715
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Entry
FAZ97_05715 CDS
T07262
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03410
Base excision repair
pacp03430
Mismatch repair
pacp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FAZ97_05715 (recJ)
03430 Mismatch repair
FAZ97_05715 (recJ)
03440 Homologous recombination
FAZ97_05715 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacp03400
]
FAZ97_05715 (recJ)
DNA repair and recombination proteins [BR:
pacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FAZ97_05715 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FAZ97_05715 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FAZ97_05715 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QGZ54459
UniProt:
A0A7Z2J8I7
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Position
1:complement(1278194..1279900)
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AA seq
568 aa
AA seq
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MTRIVTRACSPADTEALVRHGLHPVLARLYASRGICQPDEIETGLARLIPPTGMKGLDEA
ATLLADALEADCRMLVVADYDCDGATACAVAVRGLRMFGAQIDYLVPNRFEYGYGLTPEI
VALAAQRKGGPPDVLITVDNGIASVEGVEAANELGIEVLVTDHHLPGDTLPDARAIVNPN
QPGCEFPSKCIAGVGVMFYTLLALRAELRKRGAFSDGKPEPRLDGLLDLVALGTVADVVK
LDCNNRVLVAQGLQRVRNGRMQPGIAALFRAAGRDAKSASGFDFGFALGPRLNAAGRLSD
MSLGIECLTTDDVGRAWELAQQLDSMNRERREIEAGMQQQALADLADVDPQGKATLTLFN
EGWHQGVIGIVAGRLKERYHRPSFTFAPADDDGELVKGSGRSIPGFHLRDAVDLISKREP
GLIQKFGGHAMAAGMTIAATDVPRFAAAFERVGREWLTEEALARTVETDGDLEDAYFTPD
FVEMLDAAVWGQGFPAPVFSGEFEVASQALVKDKHLKLQLLRGRQRFNAIWFNHTESLPQ
HTTVAYRLVRDTWNGVSRVQLVVEHAAL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgacccgaatcgtcacccgcgcctgctcgcccgccgacaccgaagcgctcgtgcgccac
ggcctgcatccggtgctcgcacgcctctacgcctcgcgcggcatttgccagcccgatgag
atcgaaaccggcctcgcgcgcctcatcccgcccacgggcatgaagggcctcgacgaggcc
gccacgctgctcgccgacgcgctcgaagccgactgccgcatgctcgtggtcgccgactac
gactgcgacggcgcaaccgcctgcgcggtggccgtgcgcggcctgcgcatgttcggcgcg
cagatcgactatctcgtgccgaaccgcttcgagtatggctacggcctcacgcccgagatc
gtcgcactcgccgcccagcgtaaaggcgggccgcccgacgtcctgatcacggtggacaac
ggcatcgccagcgtggaaggcgtcgaggccgctaacgagctcggcatcgaagtgctcgtg
accgaccaccacctgcccggcgacacgctccccgacgcgcgcgccatcgtcaatccgaac
cagccgggctgcgagtttccgagcaagtgcatcgcgggcgtgggcgtcatgttctacacg
ctgctcgcgctgcgcgcggaattgcgcaagcgcggcgcgttcagcgatggcaagcccgag
ccgcgcctcgacggcctgctcgatcttgtcgcgctcggcaccgtcgccgacgtcgtcaag
ctcgactgcaacaaccgcgtgctcgtcgcgcagggcttgcaacgcgtgcgcaacggccgc
atgcagccgggcatcgcagcgctctttcgcgccgcgggccgcgacgcgaaaagcgcgtcg
ggcttcgatttcggctttgcgctcgggccccgtctgaacgcggccggccggctctcggac
atgtcgctcggcatcgaatgcctgaccaccgacgacgtgggccgcgcgtgggaactggcc
cagcagctcgactcgatgaaccgcgagcgccgcgagatcgaggccggcatgcagcagcag
gcgctcgccgacctcgccgatgtcgatccgcaaggcaaggcgacactcacgctgttcaat
gaaggctggcaccagggcgtgatcggcatcgtcgcggggcgcctgaaggagcgttatcac
cgcccctcgttcaccttcgcgcccgccgacgacgacggcgaactcgtgaaaggctcgggc
cgttcgatccccggttttcatctgcgcgacgccgtcgatctcatcagcaagcgcgagcct
ggtttgatccagaagttcggcggccacgccatggccgcgggcatgacgatcgccgccacc
gacgtgccgcgtttcgccgccgcgttcgaacgcgtaggccgcgaatggctcaccgaagaa
gcgctcgcgcgcacggtcgagaccgacggcgatctcgaagacgcctacttcacgcccgat
ttcgtggagatgctcgacgccgccgtgtggggccagggcttcccggcgcccgtgttctcg
ggcgaattcgaagtggcttcgcaggcgctcgtgaaagacaagcacctcaagctgcaactg
ctgcgcggtcgccagcgcttcaacgcgatctggttcaatcacaccgagtcgctgccgcaa
cacaccaccgtcgcttaccgcctcgtacgcgacacctggaacggcgtctcgcgcgtgcaa
ctcgtcgtggagcacgcggcgctctga
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