KEGG   Paraburkholderia acidiphila: FAZ97_08170
Entry
FAZ97_08170       CDS       T07262                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pacp  Paraburkholderia acidiphila
Pathway
pacp02024  Quorum sensing
pacp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pacp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FAZ97_08170 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FAZ97_08170 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pacp03019]
    FAZ97_08170 (hfq)
   03036 Chromosome and associated proteins [BR:pacp03036]
    FAZ97_08170 (hfq)
Messenger RNA biogenesis [BR:pacp03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FAZ97_08170 (hfq)
Chromosome and associated proteins [BR:pacp03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FAZ97_08170 (hfq)
SSDB
Motif
Pfam: Hfq LSM SelB_WH1 Hfq_1
Other DBs
NCBI-ProteinID: QGZ54897
UniProt: A0A7Z2G461
LinkDB
Position
1:1820503..1820994
AA seq 163 aa
MPSAESHPQNDFMNAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKRA
ISTIQLDTGTRPGPRPGGARSSHGEHTSRGPHGSHGGHGPREQREPREPRENWSAPSGAP
SGTSGTPGNDRTSQDGPVVVTRRRRLYGAVNNGGNGGEGSGNS
NT seq 492 nt   +upstreamnt  +downstreamnt
atgccttccgcagaatcgcacccgcaaaacgacttcatgaacgccgcgcgtaaggaaaga
aagcgcgtcgaaatctatctggtcaacggcatccgcctgaccggatgcatcgagtcgttc
gatcagtacctggtgatgctgcgcacgcccgtcggcctgcaaggcatctacaaacgcgcc
atttcgaccatccagctcgacaccggcacccgtcctggtccgcgcccgggcggggctcgc
agctcgcacggcgagcatacgagccgtggcccgcacggcagccatggcggccatggtccg
cgtgaacaacgagaaccgcgcgagccgcgcgaaaactggtcggcgccgtccggcgcgccc
tcgggcacgtcgggcacacccggcaacgaccgtacgtcccaggacggcccggtcgtcgtc
acgcgccgccgccgcctttacggcgcggtgaacaacggcggcaacggcggcgaaggctcg
ggcaacagctaa

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