Paraburkholderia acidiphila: FAZ97_08240
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Entry
FAZ97_08240 CDS
T07262
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pacp
Paraburkholderia acidiphila
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacp03016
]
FAZ97_08240 (truB)
Enzymes [BR:
pacp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FAZ97_08240 (truB)
Transfer RNA biogenesis [BR:
pacp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAZ97_08240 (truB)
Prokaryotic type
FAZ97_08240 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA
TruB_C
UPF0113
Motif
Other DBs
NCBI-ProteinID:
QGZ54911
UniProt:
A0A7Z2G4G4
LinkDB
All DBs
Position
1:complement(1838848..1839816)
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AA seq
322 aa
AA seq
DB search
MTASSKQNQGAARPKVPRRLLDGVLLLDKPVGLSSNDALIRAKRLYRVKKAGHTGTLDPL
ASGLLPLCFGEATKFSQDLLEADKTYEATMRLGIRTATGDAEGEAIETREVNCDEAAVRE
AMTRFLGDIVQVPPMYSALKRDGKPLYEYARAGQTVEREGREVKILALEMIACALPEAPE
VTFRVTCSKGTYVRTLAEDIGETLGCGAHLVMLRRTGVGALTLEHAVTLDALTAADEPVR
DTWLRPVDALLSTFPALTLNEEAARRFTHGQRLPLNELVLDRAVCEAAERVRVYAEDGRL
LGVAKAANGVLAPERLVVSGAA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcatcgaaacagaatcagggcgcggcccgacctaaggtgccgcgccgcctg
ctcgacggcgtgctgctgctcgacaagcccgttggcctttccagcaacgacgcgctgatt
cgcgcgaagcggctttatcgcgtgaagaaggcgggacacaccggcacgctcgatccgctc
gcgtcgggcctgttgccgttgtgctttggcgaagcgaccaagttctcgcaggatctgctc
gaagccgacaagacgtacgaagcgaccatgcgccttggcattcgcactgccaccggcgac
gccgaaggcgaggcgatcgaaacgcgcgaggtcaactgcgacgaagccgcggtgcgcgaa
gcgatgacgcgctttctcggcgacatcgtgcaagtgccgccgatgtattcggcgcttaag
cgcgatggcaagccgctttatgaatacgcacgtgcgggccagacggtcgaacgcgaaggg
cgcgaggtgaagatcctggcgctcgagatgatcgcgtgcgcgctgcccgaggcgcccgag
gtcacgtttcgcgtgacctgcagcaagggtacgtacgtgcgcacgctggccgaagatatc
ggcgagacgctgggctgcggtgcgcatctcgtgatgctgcggcgcacaggcgtaggtgcg
ctcacgctcgaacatgcggtgacgctcgacgcgctcaccgctgccgatgagcctgtgcgc
gacacctggctgcgtcccgtcgatgcgctgctctccacgttccccgccttgacgctcaat
gaagaagcggcgcgccgcttcacgcatggccagcgcctgccgctcaatgagctggtgctc
gatcgcgcggtttgcgaagcggccgaacgtgtgcgcgtgtatgcggaagatgggcgtttg
ctcggcgtcgcgaaggccgcgaacggcgtgcttgcgccggagcggctggtagtgagcggc
gcagcctga
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