Paraburkholderia acidiphila: FAZ97_09945
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Entry
FAZ97_09945 CDS
T07262
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03420
Nucleotide excision repair
pacp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAZ97_09945
03430 Mismatch repair
FAZ97_09945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacp03400
]
FAZ97_09945
Enzymes [BR:
pacp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAZ97_09945
DNA repair and recombination proteins [BR:
pacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAZ97_09945
MMR (mismatch excision repair)
Other MMR factors
FAZ97_09945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QGZ55207
UniProt:
A0A7Z2J825
LinkDB
All DBs
Position
1:complement(2207990..2210248)
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AA seq
752 aa
AA seq
DB search
MESGACGCGVYGYTVCVASFRFAIFIVPAPAVSTVSVADSSVSDASHARADAANFVASWL
AKLNDAQREAVEHGGEAGYAPGSALPGPLLVIAGAGSGKTNTLAHRVAHLIAGGADPHRI
LLLTFSRRAAQEMTRRVARIAASAPGAAAVLAQGLNWAGTFHGVGARLLREYADHIGLSP
AFTINDREDSADLMNLVRHELGFSAKEKRFPSKSTCLAIYSRAVNTGDSLANVLNRSFSW
CLEWEPQLRALFAAYVDAKQKQNVLDYDDLLLYWAHMAAEPAIAADLAGRFDHILVDEYQ
DTNRLQASILLALKPDGRGLTVVGDDAQAIYSFRGATVRNILDFPAQFDPPARQVTLERN
YRSTAPILAASNAVIDAAAERFTKNLWTDRPSQQRPRLVTVADEATQAHYVVEQILEARE
AGMKLKQQAVLFRAAHHSATLEIELARRNIPFVKFGGLRFLDAAHVKDVLAVLRWAENPL
DRVAGFRVTQLLPGVGPANAARLLDQVAACTGAYRAAEALAAFAPPPRAADDWPAFASLI
DSLSMRATPWPAEFERVRRWYEPHLERNHEDAQVRLADLLQMESIASTYASRERFLTELT
LDPPDATSAESADPLLDEDYLILSTIHSAKGQEWRNVFVLNGVDGCIPSDLGAGSDEELE
EERRLLYVAMTRAKEDLHIVVPQRFYVHNQVASGDRHVWASRTRFIAAPMLPLFESRAWP
PAPVAGAPSAAGLAAAAQAKVEIAARLRKMWD
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaggcgcttgcggatgcggggtgtatggatatacagtatgcgtcgcttcgttc
cgattcgccatattcatcgtcccagcgcccgccgtgtccactgtttccgttgccgattcc
tccgtctccgacgccagccacgcgcgtgccgacgcggccaatttcgtggcttcgtggctc
gcgaaactcaacgacgcgcagcgcgaggccgtcgagcacggcggcgaagcgggctacgca
ccgggctcggcgctgccgggcccgttgctcgtgatcgcaggcgccgggtcgggcaagacc
aacacgctggctcaccgcgtcgcgcacctgatcgcgggcggcgccgacccgcaccgcatc
ctgctgctcacgttttcgcgccgcgccgcgcaggaaatgacgcggcgcgtggcgcgcatc
gccgccagcgcgccaggcgcggccgcagtgctcgcgcaagggctcaactgggcgggcacg
tttcacggtgtaggcgcccggttgttgcgcgagtacgcggatcacatcggcctttcgccg
gcgttcacgatcaacgaccgcgaagattccgccgatctcatgaatctcgtgcgccacgag
ctgggattctcggcgaaggaaaagcgctttccctcgaaatcgacttgccttgcgatttac
tcgcgcgcggtcaacacgggcgactcgctcgccaacgtgctcaaccgttcgttctcgtgg
tgcctcgaatgggagccgcaactgcgcgcgctgttcgcggcgtacgtggacgccaaacag
aagcagaacgtcctcgactatgacgatctcctgctctactgggcgcacatggccgcggag
cccgccattgccgccgatctcgcgggccgcttcgatcacatcctcgtcgacgaataccag
gacaccaaccgcctgcaggcctcgatcctgctcgcgctcaagcccgacggccgtggcctg
accgtggtcggcgacgacgcccaggcgatctactcgtttcgcggcgcgacggtgcgcaac
attctcgacttcccggcgcagttcgatccgccagcgcgccaggtgacgctcgagcgcaac
taccgttcgacggcgccgatcctcgcggcctcgaacgccgtgatcgacgccgccgccgag
cgcttcaccaagaacctgtggaccgaccgtccttcgcagcagcgcccgcgcctcgtcacg
gtggccgacgaggcaacccaggcacactacgtcgtcgagcagattctcgaggcgcgcgaa
gcgggcatgaagctcaagcagcaggcggtgctgtttcgcgcggcgcaccacagtgccacg
ctcgaaatcgaactggcgcggcgcaatatcccgttcgtgaaattcggcggactgcgtttt
ctcgatgccgcgcacgtgaaggacgtgctggcggtgctgcgttgggccgagaatccgctc
gatcgcgtggcgggctttcgcgtgacgcaattgctgccgggcgtcgggcccgccaacgcc
gctcgcctgctcgaccaggtggccgcgtgcacgggcgcgtatcgcgccgccgaggcgctc
gcggccttcgcgccgccgccgcgcgcggccgacgactggccggcgttcgcctcgctcatc
gacagcctctccatgcgcgccacaccgtggccggccgagttcgagcgcgtgcggcgctgg
tacgagccgcatctcgagcgcaatcacgaggacgcccaggtgcggctcgccgacttgctg
cagatggagagcattgcgagcacctacgcttcgcgcgagcgttttctcaccgaactcacg
ctcgatccgccggacgccacgagcgccgaatccgccgatccgctgctcgacgaggactat
ctgatcctctcgacgatccattcggcgaaagggcaggagtggcgcaacgtgttcgtgctc
aacggcgtggacggctgcataccgtccgatctcggcgcgggcagcgacgaggagctggag
gaggagcggcggctactctacgtggccatgacgcgagcgaaagaggatttgcacatcgtc
gtgccgcagcgcttttacgtgcacaaccaggtggcgtcgggcgaccggcacgtgtgggcc
tcgcgcacgcgcttcatcgcggcgcccatgctgccgctattcgaatcgcgcgcatggccg
cccgcgcccgtggcaggcgcgccgagcgcggcgggactcgccgccgccgcgcaggcgaag
gtcgagatcgccgccaggctcaggaagatgtgggactga
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