Paraburkholderia acidiphila: FAZ97_10075
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Entry
FAZ97_10075 CDS
T07262
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FAZ97_10075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacp03019
]
FAZ97_10075
03009 Ribosome biogenesis [BR:
pacp03009
]
FAZ97_10075
Messenger RNA biogenesis [BR:
pacp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FAZ97_10075
Ribosome biogenesis [BR:
pacp03009
]
Eukaryotic type
Pre-60S particles
RNases
FAZ97_10075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CTD1
Motif
Other DBs
NCBI-ProteinID:
QGZ55228
UniProt:
A0A7Z2G4T0
LinkDB
All DBs
Position
1:complement(2239254..2239883)
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AA seq
209 aa
AA seq
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MTDITAAGAPLIERTDMNLIWLDMEMTGLDPDNDRIIEIAVVVTNSTLDKLVEGPVLAIH
QPESVLDRMDEWNRNTHGRSGLTERVRASTVTEESATEQIMAFLSQYVPPGKSPMCGNSI
CQDRRFMARWMPTLERFFHYRNLDVSTLKELCRRWQPTIYKGFQKRALHTALADIHESID
ELKYYREHFLVPAPGIVPDVATGEAGPAL
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattaccgctgccggcgcaccgctcatcgagcgcaccgacatgaacctgatc
tggctcgatatggaaatgacggggctcgatcccgacaacgaccgcatcatcgagatcgca
gtggtggtgacgaactcgacgctcgacaagctcgtggaaggccccgtgctggctatccac
cagccggagtcggtgctcgaccgcatggacgaatggaaccgcaacacgcacggccgctct
ggcctcaccgagcgcgtgcgggcgtcgaccgtcacggaagaaagcgcgaccgagcagatc
atggcgttcctttcacagtacgtgccgccgggcaagtcgccgatgtgcggcaactcgatc
tgccaggaccgccgcttcatggcgcgctggatgcccacgctcgagcgcttcttccactac
cgcaaccttgacgtgagcacgctcaaggagctgtgccgccgctggcagccgactatctac
aagggtttccagaagcgcgcgttgcacacggcgcttgccgacatccatgagtcgatcgac
gaactcaagtactaccgcgagcacttcctcgttccggcgccgggcattgtgcccgacgtg
gcgacgggcgaggccggtccggcgctttga
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