Paraburkholderia acidiphila: FAZ97_13205
Help
Entry
FAZ97_13205 CDS
T07262
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FAZ97_13205 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacp03021
]
FAZ97_13205 (rpoC)
03400 DNA repair and recombination proteins [BR:
pacp03400
]
FAZ97_13205 (rpoC)
Enzymes [BR:
pacp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FAZ97_13205 (rpoC)
Transcription machinery [BR:
pacp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FAZ97_13205 (rpoC)
DNA repair and recombination proteins [BR:
pacp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FAZ97_13205 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
PYNP_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
QGZ55795
UniProt:
A0A7Z2G6A7
LinkDB
All DBs
Position
1:complement(2898476..2902726)
Genome browser
AA seq
1416 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIEPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRTELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMVLE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLETMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAINGKGEGMTFTGVSEVLRAYENK
EVELASRVNVRITEMVHNEDKSEGAPAFVPKITLYATTVGRSILSEILPPGLPFTVLNKP
LKKKEISRLINTAFRKCGLRETVIFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTAQERYNNVVDIWSATSEAVGKAMMEQLATEPVIDRDGKETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVAVADVVNPETQETIYASGDLLDEDAVETIESLGIDEVRVRTPLTCETRYGLC
ASCYGRDLGRGSRVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTATMRYVTNAKGEQVVISRSGEAIIADDHGRERERHKVPYGATLLQLDGAAIKAG
TQLATWDPLTRPIITEYGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQAAKS
VRPQVKLLDANGDEVKIPGTEHSVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQITDNGDTRFIPGEQVERSDMLDENDKMNAEDKRPATYENVLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARRAKES
SDRERFDQIAAEEAFEFGTPETPAAEQPQQPHTTDE
NT seq
4251 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaagaagaagttttcgacgcgatc
aagatcggtctggcatcgccggacaagatccgttcgtggtcgttcggcgaagtgaagaag
ccggagaccatcaactaccgcacgttcaagccggagcgggatggtctgttctgcgcgaag
atttttggtccgatcaaggactacgaatgcctttgcggcaagtacaagcgcctgaagcat
cgtggcgtgatctgcgagaagtgcggcgtggaagtcacgctcgccaaggtgcgtcgcgaa
cgcatgggccacatcgagctggcctcgccggtcgctcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcctacgtggtgatcgaaccgggcatgacgccgctgaaagcgcggcagatcatg
accgaagaggattactacaacaaggtcgaggagtacggtgacgaattccgcgccgagatg
ggcgcggaaggcgtgcgcgagctgctgcgtgcgatcaacatcgacgaacaggtcgagacg
ctgcgcaccgagctgaagaacaccggctcggaagcgaagatcaagaagtacgcgaagcgc
ctgaaggtgctcgaggccttccagcgttcgggcatcaagcccgaatggatggtgctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctcgtgccgctggacggtggccgcttc
gcgacctcggacctgaacgacctgtatcgccgcgtcatcaaccgtaacaaccgtctgaag
cgtctgctcgagctgaaggcgccggagatcatcgtccgcaacgaaaagcggatgctccag
gaagcggttgactcgctgctcgacaacggccgtcgcggcaaggcgatgacgggcgcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggccgcttccgtcag
aacctgctgggcaagcgcgtggactactcgggccgttcggtcatcgtggtgggtccgacg
ctcaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctggaaacgatgggcgttgccacgaccatcaaggctgcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcatccg
gtcatgctgaaccgtgcgcctacgctgcaccgtcttggcattcaggctttcgagccggtg
ctgatcgaaggtaaggcaatccagttgcacccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgttccgctgtcgctcgaagcgcagatggaagcg
cgtacgctcatgctcgcctcgaacaacgtcctgtttccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctgggcctgtactacgccacgcgtgaagcgatcaacggc
aagggcgaaggcatgacgttcacgggcgtgtcggaagtgctgcgcgcctacgagaacaag
gaagtcgagctggcctcgcgtgtgaacgtgcgtattaccgaaatggtccacaacgaggac
aagtcggaaggcgcaccggcattcgtgccgaagatcacgctgtacgcgaccacggtcggc
cgttcgatcctctcggaaatcctgccgccgggcctgccgttcacggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgtctgatcaacaccgcgttccgcaagtgcggtctgcgt
gaaacggtgatctttgccgaccagctgatgcagtcgggcttccgccttgcaacgcgcgcc
ggtatttcgatctgcgtggacgacatgctcgtgccgccgcagaaggaaaccatcgtcggc
gacgccgcgaagaaggtgaaggagtacgaccgtcagtacatgtcgggtctcgtcaccgcg
caagaacgctacaacaacgtggtcgacatctggtctgcaacgtcggaagcggtcggcaag
gcgatgatggagcagctcgcgacggaaccggtcatcgaccgcgacggcaaggaaacgcgt
caggaatcgttcaactcgatctacatgatggccgactcgggcgcgcggggttccgcggtc
cagatccgtcagctggcgggtatgcgcggcctgatggcgaagccggacggctcgattatc
gaaacgccgattaccgcgaacttccgcgaaggtctgaacgtgttgcagtacttcatctcg
acccacggtgcacgtaagggtctggctgatacggcactgaagaccgcgaactcgggttac
ctgacgcgtcgtctcgtcgacgtcacgcaggatctcgtggtcgtcgaggacgattgcggc
acgtcgaacggcgtggcgatgaaggcactcgtggaaggcggtgaagtcgtcgaagcgctg
cgcgaccgtattctcggtcgtgtcgcggtggcggacgtcgtcaatccggaaacgcaggaa
acgatctacgcttcgggcgacctgctcgacgaagacgcggtcgaaacgatcgaaagcctc
ggcatcgacgaagtgcgcgtgcgcacgccgctcacctgcgaaacgcgttacggcctgtgc
gcctcgtgctacggccgcgacctgggtcgtggctcgcgcgtgaacgtcggcgaagctgtc
ggcgtgatcgcagcgcagtcgatcggcgaaccgggcacgcagctcacgatgcgtacgttc
cacatcggtggtgctgcgtcgcgtgcggcagtggcctcgtcggtggaagccaagtcgaac
ggtaccgtgcgcttcacggccacgatgcgttacgtcacgaatgcgaagggcgagcaagtc
gtcatctcgcgttcgggcgaagccatcatcgccgacgatcacggccgcgagcgcgagcgt
cacaaggtgccgtacggcgcgacgctgctgcagctcgatggcgccgcgatcaaggcaggc
acgcagctcgcaacgtgggatccgctcacgcgcccgatcatcaccgagtacggcggtacg
gtgaagttcgagaacgtcgaggaaggcgtgaccgtggccaagcagatcgacgacgtcacg
ggtctgtcgaccctcgtcgtgatcgacgtgaagcgccgcggttcgcaggctgcgaagagc
gtgcgtccgcaggtcaagctgctcgacgcgaacggcgacgaagtgaagatcccgggcacg
gagcactcggtgcagatcggcttccaggtcggcgcactgatcaccgtgaaggacggtcag
caagtgcaggtcggtgaagtgctcgcacgtatcccgaccgaagcgcagaagacgcgtgac
attaccggtggtctgccgcgtgtggcggaactgttcgaagcacgttcgccgaaggacgca
ggtatcctggcggaagtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgttatcacggacctcgaaggcaatcagcacgagttcctgatcgcgaaggaaaag
caggtgctggtccacgacggtcaggtcgtcaacaagggcgaaatgatcgtggacggcccg
gccgatccgcacgacatcctgcgtctgcagggtatcgaagcgctgtcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgatcgtgcgtcagatgctgcgtcgtgtgcagatcaccgataacggtgatacgcgcttc
attccgggcgagcaggtcgagcgttcggacatgctggacgaaaacgacaagatgaacgcc
gaggacaagcgcccggcaacgtacgagaacgtgctgctcggtatcacgaaggcatcgctc
tcgaccgattcgttcatctcggcggcatcgttccaggaaacgacgcgcgtgctgaccgaa
gcggcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtcatcgtcggc
cgtctgattccggctggtacgggtctcgccttccacaaggcgcgccgtgcgaaggaatcg
tcggatcgcgagcgtttcgaccagatcgcagcggaagaagcgttcgagttcggtacgccg
gaaaccccggctgccgagcaaccgcaacagccgcatacgacggacgagtaa
DBGET
integrated database retrieval system
