Paraburkholderia acidiphila: FAZ97_26875
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Entry
FAZ97_26875 CDS
T07262
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pacp
Paraburkholderia acidiphila
Pathway
pacp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAZ97_26875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacp03019
]
FAZ97_26875
Enzymes [BR:
pacp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FAZ97_26875
Messenger RNA biogenesis [BR:
pacp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FAZ97_26875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
B12-binding
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QGZ58605
UniProt:
A0A7Z2GB72
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All DBs
Position
3:complement(586396..587841)
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AA seq
481 aa
AA seq
DB search
MSFASLGLIDPLLRNVQDLNYQTPTPVQAKAIPAVLGGRDVMAGAQTGTGKTAGFALPLL
QRLVQHGPAVSSNRARVLVLVPTRELAEQVLQSFMAYGKGLDLRFLAAYGGVSINPQMMK
LRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARELNAVFAALPAQR
QTLLFSATFTDDIRAMAASILRDPLNISVSPPNATASRIKQWVVTVDKRNKPDLFMHLVA
ENNWEHALVFVKTRTGVDYLAAMLEDAGYAVDTIHGDKPQPARLRALERFKTRDVQMLVA
TDVAARGLDIDDLPLVINVDLPIVAQDYVHRIGRTGRAGASGVAVSLVCADEAPQLAAIE
ALIRQTLRREEEPGFEAEHRVPETSATGQIIKKPKKPKKPKVPQATPGAVQVPGKKPRPQ
NGENTRKPAAQHAAPAGRGTNFTSGSPFSVQKPRSKPASKPAAGSRKPAGKPAGGRGKRQ
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgcctcgcttggcctgatcgatcccttgctgcgcaatgtgcaggacctcaat
taccagacacctacgccggtgcaggccaaggcgattcctgctgtgctcggtggccgtgac
gtcatggctggagcacaaaccggcactggcaaaacggcggggtttgcgctgccgctgttg
caacggctggtgcagcacggaccggcggtgtccagcaatcgcgcgcgtgttctggtgctg
gtgcccacgcgcgaactggccgaacaggtgctgcaaagctttatggcttacggcaaaggt
ctcgacttacgttttctggccgcctacggcggggtgagtatcaacccgcagatgatgaag
ctgcgcaaaggcgtggatgtgctcgtcgccacgccaggccgtttgctggatctgaatcgc
cagaacgccgtgcagttcgatcaggtgcaaacgctggttctggacgaagccgaccgcatg
ctggatctgggctttgcgcgcgaactcaacgccgtctttgccgccctgcccgcccagcgg
cagaccctgctgttttccgccaccttcaccgacgatatccgcgccatggcggcgagcatt
ctgcgcgacccgctcaatatcagcgtcagcccacccaatgccacggccagcaggatcaag
caatgggtggtgacggtggacaaacggaacaagcccgacctcttcatgcacctcgtggcc
gaaaacaactgggagcacgcgctggtgttcgtcaaaacccgcacgggcgtggattacctg
gcggccatgctggaggatgcgggctacgcggtcgacaccatccacggcgacaaaccgcag
cccgcacgcctgcgcgcgctggagcgcttcaagacgcgcgacgtgcaaatgctggtcgcc
accgatgtggctgcgcgcgggctggatatcgacgatctgccgctggtgatcaacgtggat
ctgccgatcgtggcgcaagactatgtgcaccgtattggccgtaccggccgcgcgggcgcg
agcggcgtggcggtgtccctcgtgtgcgccgacgaagcaccgcaactggccgcgatcgaa
gcgctgatccggcaaacgctgcgccgcgaagaagaacccggcttcgaagccgaacaccgc
gtgccggaaaccagcgcgacgggccagatcatcaagaaacccaaaaagcccaagaagccg
aaagtgccgcaagcgacgccgggcgccgtgcaggttcccggcaaaaagccgcgcccgcaa
aacggcgaaaacactcgcaagcctgcggcgcagcacgctgcgcccgccggcagaggcaca
aacttcaccagcggtagcccgttcagcgtgcaaaagccccgtagcaaacccgccagcaag
ccggctgccggttcacgtaagcctgctggcaaacccgccggtggccgcggcaagcggcaa
ccctga
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