Pigmentiphaga aceris: FXN63_00015
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Entry
FXN63_00015 CDS
T06198
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pacr
Pigmentiphaga aceris
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacr03032
]
FXN63_00015 (gyrB)
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_00015 (gyrB)
Enzymes [BR:
pacr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FXN63_00015 (gyrB)
DNA replication proteins [BR:
pacr03032
]
Prokaryotic type
DNA Topoisomerases
FXN63_00015 (gyrB)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FXN63_00015 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QEI04401
UniProt:
A0A5C0AUQ6
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Position
2847..5396
Genome browser
AA seq
849 aa
AA seq
DB search
MTDQNNSADTGSSDSSYLTQNTAINNNTPGASDAYGSDSIKMLKGLEAVRKRPGMYIGDT
SDGSGLHHMVFEVVDNAIDEALAGHCDEIVVTIHLDNSISVTDNGRGIPTDVHKDDEFNR
SAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSVWLRLTIDRNGETHFMEFRQG
ARVEPLKVIGTTEKRGTKVHFLADPEIFTHVEFHYEILSKRLRELSFLNDGVKIKLVDER
QGKEEDFAFAGGVRGFVEYINRAKTVLHPNVFHVSAESSAGGVPVGVDVSMQWNDTYGEN
VLAFTNNIPQRDGGTHITGLRAAMTRVINKYITESEVAKKAKVETTGDDMREGLTCVLSV
KVPDPKFSSQTKDKLVSSEVRPAVEDAVAKALDSWLQEHPLDAKALCGKIVEAARAREAA
RKAREMTRRKGVLEGAGLPGKLADCQEKNPALSEIYIVEGDSAGGSAKQGRDRKFQAILP
LRGKVLNVEKARFDKLISSEQITTLITALGTSIGPEDFNIDKLRYHRIIIMTDADVDGAH
IRTLLLTLFYRQMSELVERGHIYIAQPPLYKVKVGREERYLKDDAEEAQFMLQLALKDAQ
LIPREGGDPIMGDTLAELARKYNLADAVIARLARHNDERTLSAIVTGVEIDISSAEAAAK
SAAALQVALEDPSMPGVVKVFAESDEVEEPAEGEEAAPVRHRVVIHRMHHGNVRVTVLNN
DFVGGSDYRVLHEAAHTFTTLIGEGAKVMRGEGEKRKELAVTEFRTALQWLLSEAERGVS
KQRYKGLGEMNPGQLWETTMDPTVRRLLKVQIEDAISADGIFTTLMGDHVEPRRAFIETH
ALMAGNIDV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcagaacaactcggccgacaccggcagcagcgacagcagctacctgacccag
aacaccgcgatcaacaacaacaccccgggcgcatccgacgcctacgggtcggactcgatc
aagatgttgaagggcctggaagcggtgcgcaagcgcccgggcatgtacatcggcgatacc
tccgacggctcgggtctgcaccacatggtcttcgaggtggtcgacaacgccattgacgaa
gcgctggctggccactgcgacgaaatcgtcgtgaccatccacctggacaactcgatctcg
gtcaccgacaacggccgtggcattcccaccgacgtgcacaaggacgacgaattcaaccgc
agcgcggctgagatcgtcatgaccgaactgcacgcgggcggcaagttcgaccagaactcc
tacaaggtgtctggcggcctgcacggcgtgggcgtgtcctgcgtgaacgcgttgtccgtg
tggctgcgcctgaccatcgatcgcaacggcgaaacccacttcatggagttccgccaaggt
gcgcgtgtggagccgctgaaggtcatcggcacgaccgagaagcgcggcaccaaggtgcac
ttcctggccgacccggaaatcttcacgcacgttgaattccactacgaaatcctgtccaag
cgcctgcgagaactgtccttcctgaacgacggcgtgaagatcaagttggtcgacgagcgc
caaggcaaggaagaagactttgcgttcgccggtggcgtgcgcggcttcgtggaatacatc
aaccgcgccaagaccgtgctgcacccgaacgtgttccacgtgtcggcagaatcgtcggcc
ggtggcgtgcccgtgggcgtggacgtgtccatgcaatggaacgacacctacggtgaaaac
gtcctggccttcaccaacaatattccgcagcgcgatggcggcacgcacatcaccggcctg
cgcgccgcgatgacgcgcgtcatcaacaaatacatcacggaaagcgaagtcgccaagaaa
gccaaggtggaaaccaccggcgacgacatgcgcgaaggcctgacctgcgtgctgtccgtg
aaagtgcccgacccgaaattcagcagccagaccaaagacaagctggtgtcgtctgaagtg
cgccccgccgtggaagacgccgtggccaaggcactggattcctggttgcaggaacacccg
ctggacgccaaggccctgtgcggcaagatcgttgaagctgcacgtgcccgcgaagccgcc
cgcaaggcgcgcgaaatgacccgccgcaagggcgtgctggaaggcgcaggcctgcccggc
aagctggccgactgccaggaaaagaaccccgcgctgtctgaaatctacatcgtcgagggt
gactccgcaggcggttccgccaagcaaggtcgcgaccgtaaattccaggccatcttgccg
ctgcgcggcaaggtgctgaatgtggaaaaagcgcgcttcgacaagctgatcagcagcgaa
cagatcaccaccctgatcaccgcactgggcaccagcatcgggccggaagacttcaacatc
gacaagctgcgctaccaccgcatcatcatcatgaccgatgctgacgtcgacggcgcgcac
atccgcaccctgctgctgacgctgttctaccgtcagatgtcggaactggtcgaacgcggc
cacatctacatcgcccagccgccgctctacaaggtcaaggttggccgcgaagagcgctac
ctgaaggacgatgccgaagaagcgcaattcatgctgcaactggcgctgaaagacgcccag
ttgattccgcgtgaaggcggcgacccgatcatgggcgacacgctggccgagctggcccgc
aagtacaacctggccgacgccgtgatcgcccgcctggcacgccacaacgacgagcgcacg
ctgtcggccatcgtgactggtgtcgagatcgacatcagctctgctgaggctgctgcgaag
tccgccgccgccctgcaagtggccctggaagatccgtccatgcccggcgtggtgaaggtg
tttgccgagtccgatgaagtcgaagagccggccgaaggcgaagaagccgcgcctgtgcgt
caccgcgtggtcatccaccgcatgcaccacggcaacgtgcgcgtcacggtgctgaacaat
gacttcgtcggtggttccgactaccgcgtgctgcatgaagcggcgcacaccttcacgacc
ttgattggtgagggtgcgaaggtgatgcgtggtgaaggtgagaagcgcaaggaactggcc
gtgacggaattccgcactgcgctgcagtggctgttgtcggaagctgaacgtggcgtgtcg
aagcagcgttataagggtctgggcgagatgaatcctgggcagctgtgggaaaccacgatg
gacccgacggtgcgccgtttgttgaaggtgcagatcgaggatgcgatctcggccgatggc
atcttcacgacgctgatgggtgaccacgttgaaccgcgtcgcgcgttcattgagacgcat
gcgttgatggcggggaatattgacgtttga
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