KEGG   Pigmentiphaga aceris: FXN63_03230
Entry
FXN63_03230       CDS       T06198                                 
Name
(GenBank) RtcB family protein
  KO
K14415  tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
Organism
pacr  Pigmentiphaga aceris
Brite
KEGG Orthology (KO) [BR:pacr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pacr03016]
    FXN63_03230
Enzymes [BR:pacr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.8  3'-phosphate/5'-hydroxy nucleic acid ligase
     FXN63_03230
Transfer RNA biogenesis [BR:pacr03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing ligase complex
    FXN63_03230
 Prokaryotic type
   tRNA splicing ligases
    FXN63_03230
SSDB
Motif
Pfam: RtcB
Other DBs
NCBI-ProteinID: QEI04964
UniProt: A0A5C0ATL1
LinkDB
Position
769606..770844
AA seq 412 aa
MSKQVSKQHYNIEEVPGGVSVKMWTKGVPVDDKAREQLANAARLPVVFKHIAVMPDVHVG
IGATIGSVIPTIRAIIPAAVGVDLGCGMMAAKTTLRAEDLPDNLGPLRSAIEAAVPHGFS
PNRNRRDPGSWDTPPDSVDKVWGTLVDEFEALCELHPRLEKTNNRKHLGTLGTGNHFIEV
CLDEAGFVWFMLHSGSRGVGNAIGTHFIELAKKDAERNQRNLPDKDLAYFEEGAQYFGDY
VRGVSWAQKFALRNREVMMANLIATVRKVIAKPFESHVEAVNCHHNYVQKERHFGEDVFI
TRKGAVSAKRGELGIIPGSMGARSYIVRGLGNPESFDSCSHGAGRVMSRTQAKKAFTVAD
QIKATAGVECRKDVNVIDEIPMAYKDIDAVMAAQKDLVEVVHTLKQIVCVKG
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgtccaaacaagtatccaagcagcactacaacattgaagaagtccccggcggtgtgtcg
gtgaagatgtggaccaagggcgtcccggtggacgacaaggcccgcgaacagcttgccaac
gcggcgcggctgccggtggtgttcaagcacatcgcggtcatgccggacgtgcacgtgggc
atcggcgccaccatcggctcggtaatcccgaccatccgcgccatcattccggcggcagtc
ggtgtggacctgggctgcggcatgatggccgccaagaccacgctgcgcgcggaagacttg
cccgacaacctggggcctctgcgctcggcgattgaggcggccgtgccgcacgggttttct
ccgaatcgcaaccgtcgtgacccgggcagctgggacacgccgcccgattctgtagacaag
gtctggggcacgctggtcgatgaattcgaagccttgtgcgagctgcatccgcgcttggaa
aaaaccaacaaccgcaagcacttgggcacgctgggtaccggcaatcacttcattgaagtc
tgcctggatgaagcaggtttcgtgtggttcatgctgcactcgggctcgcgtggtgtgggc
aatgccatcggcacgcacttcattgaactcgccaagaaagacgctgagcgcaatcagcgc
aatctgcccgacaaagacctggcgtacttcgaggaaggtgcgcagtacttcggtgactac
gtgcgcggcgtgtcgtgggcgcagaagtttgcgctgcgcaatcgggaagtgatgatggcg
aacctgatcgccacggtgcgcaaggtaatcgccaagccgttcgaatcacatgtggaagcg
gtgaattgccaccacaactacgtgcagaaggaacgtcacttcggcgaagacgtgttcatt
acccgcaagggtgcagtcagcgccaagcgcggtgaactcggcatcattcccggcagcatg
ggggcgcgcagctacatcgtgcgtggcctgggcaacccggagagtttcgacagctgcagc
cacggcgcaggccgggtaatgagccgcacgcaggcaaagaaagcgtttacggtggccgac
cagatcaaagcgactgcgggtgtggaatgccgtaaagacgtcaatgtgatcgacgaaatt
ccgatggcctacaaggacatcgacgcggtgatggcagcgcagaaagacctggtggaagtg
gtgcacaccttgaagcagatcgtgtgtgtgaagggatag

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