Pigmentiphaga aceris: FXN63_05485
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Entry
FXN63_05485 CDS
T06198
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03420
Nucleotide excision repair
pacr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXN63_05485
03430 Mismatch repair
FXN63_05485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_05485
Enzymes [BR:
pacr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FXN63_05485
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXN63_05485
MMR (mismatch excision repair)
Other MMR factors
FXN63_05485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
DUF5710
AAA_19
Viral_helicase1
AAA_30
UvrD_C_2
AAA_22
ResIII
AAA_16
Strep_his_triad
DEAD
Motif
Other DBs
NCBI-ProteinID:
QEI05354
UniProt:
A0A5C0AUK2
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All DBs
Position
1311597..1313744
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AA seq
715 aa
AA seq
DB search
MTFTSPTSTQLTPEQRAIVTHRARSILIGAVAGSGKTTTLAQCVAHRERGGVQGRDILVL
VFTPAAEQVFRERLAQAGASRHVRVQTYAAFARALLEGWAAAGIIDGTEAHLPDAQAMRP
HLYEAIEDASERQPDYDYRYDLTSEHAESLVNHLSRLKGTLDLRRFEHGDDAELADELDL
PRGLIGICRQYESLRNIDVGTYAFESESDYVYDVLQLAEQLQDQLDWPRYGLIVADEWHD
ANAGHIQLLRKLAHDNTQVIAAGDREQVVHSWNGADPRFMGEAYLALFPGTQRLPLSLSF
RCGPTLSACAQHLSGQRFGSARIQDTEVSVLGYQGDDMSDGARQTIDAVLALGRNAGDVT
LSDVAILLRDPHQSIPIENALIAAGIAYQVEGFASYFNRIEVRMLRGILHIVMGTIASVG
DKTEIKPIIRALGVFASVQLSAKEWTQAARVIAEHPTDIAEFYRGQLTRVHEGREELDAS
ARRWRERFANVCEFLIGKAQAWSAGDLLAYAARELQIADTTRRLFVHRVEAQAIAKSIDG
FVAHARDTGLSVSDFLAMLEQAQRRATQLKKNQHALTLATARDAKGKEWKHVLLPFLANG
EFPDTRNEPGEERRLFYVAITRASERLLLFVPHGQHNHFVDFLRLEESRLIGADSLRENL
ASAAAPAPARIYLAVPFGEKDAAKALGAQWDGVARKWWIGPAVPTRPFKRWMGGS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgactttcacatcgcctacttctactcagctcacccccgaacaacgtgcaatcgtcacg
catcgggcacgctccattctgatcggagccgttgcgggctcggggaaaaccaccacgctt
gcccagtgtgtcgcccaccgcgaacgcggtggtgtgcagggacgcgacattctggtgttg
gtgttcacacccgctgcagaacaggtatttcgtgaacgtcttgcgcaggcgggggcctcg
cgtcatgtgcgggtgcaaacctatgccgcatttgcgcgcgcgctgctggaaggctgggca
gcggcgggaatcatcgacggtaccgaggcccacttgcctgatgcgcaagccatgcggccg
catctgtatgaagccatcgaagatgcgtccgagcggcagcccgattacgactatcgctac
gacctgacgagcgaacacgccgaaagcctggtgaatcatctgtcgcggctcaagggcacg
ctcgatctacgcaggttcgagcatggcgatgacgcagaacttgccgacgagctggatctg
ccgcgcggtctgatcggcatctgccgacagtacgaaagcctgcgcaatatcgacgttggc
acctatgcgttcgaaagtgaatcggactatgtgtacgacgtgttgcagttggcagagcaa
ctgcaagaccagctcgactggccgcgttacggcttgatcgttgccgatgaatggcacgat
gcgaacgccggtcatatccagctgctgcgcaaactggcccatgacaatacgcaggtgatt
gcagcgggcgaccgcgagcaggtggtgcacagctggaatggtgccgatccgcgtttcatg
ggcgaggcttacttggccttgtttccgggcacgcagcgtctgccactgagcctgtctttc
cgctgcggcccgacgctgagtgcctgcgcacaacatctgtctggtcagcgctttggctcg
gcccgcattcaggataccgaggtgtcggtgcttggatatcagggcgacgatatgtcggac
ggtgcccgccagacaatcgatgcggtgctggcgcttggccgcaatgcgggtgatgtaacc
ctgtcggacgtggccatcttgctgcgtgacccgcatcaaagcattcctatcgaaaatgcc
ttgatcgcggcgggcattgcctatcaggtcgaaggctttgcgagctatttcaatcgcatt
gaagtgcgcatgctgcgcggcatcctgcacattgtcatgggcacgattgcatcggtaggc
gacaagaccgagatcaagccgatcatccgtgccttgggcgtgtttgccagtgtgcaattg
tcggcaaaagagtggacgcaggcggcgcgcgtcattgctgaacatccgaccgatatcgcc
gaattctatcgagggcaactgacccgggtacacgaggggcgtgaggaactggatgcctcg
gcgcggcgctggcgtgaacgttttgcgaacgtctgcgagtttctgatcggcaaggcgcaa
gcgtggtctgccggggatctattggcgtacgctgcgcgtgaattgcagatcgccgacacc
acccgccgcttgttcgtgcatcgggttgaagcgcaggccattgccaagtcgatcgacggg
ttcgtggcgcatgcacgtgacaccggcctgtctgtgagtgattttctggccatgctggag
caggcgcaacgacgcgccacgcagctgaagaaaaatcagcacgcgctgaccttggccacg
gcacgagacgccaagggcaaggagtggaaacacgtgctgctgcctttcctggcaaatggc
gagtttcccgatacccgtaatgagccgggtgaagaacggcgcttgttctacgtggcgatc
acccgcgctagtgagcgattgctgttgttcgtgccgcatggtcagcacaaccattttgtg
gatttcctgcggcttgaagaatcccgcctgatcggggccgacagcttgcgcgagaacctg
gcctcggctgcggcaccggcacctgcgcgcatttatctggcggtgccttttggcgagaaa
gacgctgccaaggcactgggcgcgcagtgggatggggtggcgcgtaagtggtggatcggg
cctgctgtgccaacgcgcccgttcaagcgctggatggggggaagctga
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