Pigmentiphaga aceris: FXN63_06040
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Entry
FXN63_06040 CDS
T06198
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pacr
Pigmentiphaga aceris
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacr03032
]
FXN63_06040
03036 Chromosome and associated proteins [BR:
pacr03036
]
FXN63_06040
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_06040
DNA replication proteins [BR:
pacr03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FXN63_06040
Chromosome and associated proteins [BR:
pacr03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
FXN63_06040
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
FXN63_06040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QEI09146
UniProt:
A0A5C0B5G5
LinkDB
All DBs
Position
1441559..1441864
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AA seq
101 aa
AA seq
DB search
MTKSELIARLAARYPQLVAKDADYAVKTILDAMAQSLSEGHRIEIRGFGSFSLSKRPPRI
GRNPKSGERVLVPEKRVPHFKAGKELRERVDGPLDSAASTG
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatccgaattgatcgcccgtctggcggctcgctatccgcagctggtcgccaag
gatgccgattacgcagtgaagacgattctcgacgcgatggcccaatccttatcggaaggt
catcgcatcgaaatccggggtttcggcagtttttcgctgtcgaagcgcccaccgcgtatc
ggtcgcaatcccaagtctggcgaacgggtgctggtccctgaaaaacgggtaccgcacttc
aaggccggcaaggaattgcgcgaacgtgtcgatggcccgctggacagcgccgcctcgacc
ggttga
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integrated database retrieval system
