Pigmentiphaga aceris: FXN63_06345
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Entry
FXN63_06345 CDS
T06198
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FXN63_06345 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_06345 (recC)
Enzymes [BR:
pacr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FXN63_06345 (recC)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FXN63_06345 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QEI09155
UniProt:
A0A5C0B4J8
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All DBs
Position
1505556..1509098
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AA seq
1180 aa
AA seq
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MIVQSNRLEDLRQLAVGWMRRYPLNPLENEVILVQSNGIAQWLKLALAADPDAADGGGCG
IAAAIDVQLPARFQWQAYRSVLERGTIPATSLLDRAPLTWRLMRLLPALLAQPVFAPLHR
FLHGDDDLRKRHQLSERLADLFDQYQVYRADWLTDWAAGRDVLRTVAGTTRPLDAEQSWQ
PALWRAVLADVGPEGLAQSRAGVHQRFLEQLSALDQAPQRLPRRVMVFGISSMPAQTLEA
LAAMARFVQVLLCVHNPSQHHWGDIVADKELLRHEYRRQQRRPGTPDQLDADAMHAHGQP
LLAAWGKQGRDYISLLDRYDEPALYSALFQDVVSGRIDLFDAAPPDTLLAQLQNDVLNLR
PLAETRQTWPPVDPRSDRSIRFEVSHSPQREVEILHDQLLARFNADPSLRPRDVIVMVPD
IDAYAPHIRAVFGQVARDDLRFVPFTIADQGQRGREPLLIAVELLLKLPDSRFAVSEVLD
LLDVPAVRARFGISDVHLPVIHRWIEGAGVRWGVDGEHRQQFGMPAALDQNSWYFGLRRM
LLGYAVGNGDALGEIEPYDEVGGLDAALAGLLAELLARLDMAREELSQPATPVVWTARLR
ALLSIFLLVEDDRDALHIDRLITLLEDWAALCRDAGLETELPLSVVREAWLAGLDQGGLT
QRFLSGSVNFCTLMPMRAIPFRVVCLLGMNDGDYPRIQRPMDFDLMGNDYRPGDRSRRED
DRYLLLEAMLSARDHLYVSWVGRSIQDNSERAPSVLIGQLRDHLAAGWRLDRGEGDAALP
ETMSLVDALTCEHPLQPFSRRYFGSTEPQDQAQSEGQPNLQPKAWPHYFTYAREWRDALS
SDQGRDDEAPLPPLVVTEPLNLATLSDFLVNPVAAFLRQRLNVRFDRALPTSEDNEVFEL
DGLQTWQLQDELSDRLRDWAETDGDETTLAPRLAQEMQRLQRQGRLPMAAFGQFAARRLE
TPLPALLSRYRDALQEWTTPVPGQIAIHHVSRTDPELVIEDWAEGLRRHVDGRLARVQLI
SSKLHQGPSLRWHVLLRHWVRHLALQTIGEPVASVLVSMTDTVVLKPVAAPIAASELDTL
LGAWRDGMQRALPVACKTAFAWLEDGDYAASVAYDGAYNRPGEAAQSAALARVYADYAAL
TADGTFSEWAQTLYGPLLNTLGRKSADHSADADAGGEQSQ
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtccagagcaatcgcctggaagacctgcgccagctcgcggtcggctggatgcgc
cggtatccgctgaacccgcttgaaaacgaagtcatcctggtgcaaagcaacgggattgcg
cagtggctcaagctggcgctggccgccgaccccgacgcggcagatggcggcggttgtggc
attgctgcggccatcgacgtgcaactgccggcccgtttccagtggcaagcctatcgcagc
gtgctggaacgcggaacgattccggccacctcgctgctggatcgcgccccgcttacctgg
cgattgatgcgcttgttgcccgcgctgctggcgcagccggtttttgcgccgttgcaccgt
tttttgcatggtgacgatgatttgcgcaagcgtcatcagttgtctgaacggctggccgat
ctgtttgatcaatatcaagtctatcgagctgattggctgaccgactgggcggcggggcgc
gatgtgttgcgcacggtggcaggcaccacccgaccgctggatgccgagcaatcctggcaa
ccggcgctgtggcgggcggtgctggcagacgtggggcctgaaggcctggcgcaaagccgc
gccggggtgcatcagcgttttctcgaacaactgtcggcgctggatcaagcgccccaacgc
ctgccgcgccgggtaatggtgttcggtatttcctcaatgcctgcgcaaacgctggaagcg
ctggcggccatggccaggtttgtccaggtgctgctgtgtgtgcacaacccctcgcagcac
cactggggcgatatcgtggccgacaaggaattgttgcgccacgaatatcgtcgtcagcaa
cgccggcccggtacgccggaccagcttgatgccgacgccatgcacgcacacggccagcct
ttgctggcggcctggggcaagcagggccgggactacatttccctgctggatcgttacgac
gaacctgcgctgtacagcgcgctgttccaggacgtcgtcagcggccgcatcgacctgttc
gacgcagcgccccccgacaccttgctggcccagttgcagaacgatgtgctcaatctgcga
ccgcttgcggaaacccggcagacctggccgccggtcgatccgcgtagcgaccggtccatc
cggttcgaagtcagccacagcccgcagcgcgaagtggaaatcctgcacgaccagttgctg
gcccgtttcaacgcagaccccagcctgcgcccccgcgacgtgatcgtgatggtcccggac
atcgacgcttacgcgccgcacattcgggccgtgttcggacaggtggcgcgcgacgatctg
cgctttgtgcccttcacgattgccgaccagggccagcgcgggcgcgagcctttgctgatt
gcggtcgagttgctgctgaaactgcccgacagccgctttgccgtcagcgaagtgctggac
ctgctggatgtgccggccgtcagggcgcgctttggcatcagtgatgtgcacctgccagtg
attcatcgctggatcgaaggggcaggggttcgctggggcgtcgatggtgaacaccgtcag
cagttcggcatgccggctgcgctcgatcagaacagctggtatttcggcctgcgccgcatg
ttgctgggttatgccgtgggcaacggtgatgcgctgggggagatcgagccttacgacgaa
gtgggcgggcttgacgcggcgctggccgggttgctggccgaactgctggcgcgtctggac
atggcgcgcgaagagttgtcgcagccggccaccccagtggtgtggacggcgcggctgcgt
gccttgttgtcaatcttcctgctggtcgaagacgaccgtgatgccttgcacatcgaccgc
ctgatcacgctgctggaagactgggcggcgctgtgccgcgatgccgggctggaaaccgag
ctgccgctgagtgtggtgcgcgaagcctggttggcggggctggatcagggtgggctgact
cagcgcttcctgagcggttcggtcaatttctgcacgctgatgccgatgcgcgcgattccg
ttccgggtcgtgtgtctgctgggcatgaacgacggcgactatccgcgcatccagcgtcct
atggacttcgatctgatgggcaacgattatcggcctggtgaccgttcgcgccgcgaagac
gaccgctacctgttgcttgaagccatgctgtcagcgcgcgatcacctgtatgtcagctgg
gtcggccgcagcattcaggacaatagcgagcgtgccccttcggtgttgatcggccagttg
cgagaccacctggccgcagggtggcgactggatcggggcgagggtgacgccgccttgccg
gagaccatgtcgctggtcgatgcactgacctgcgaacacccgctgcagcccttcagtcgc
cggtatttcggttcgactgagccgcaggatcaggcgcaatccgaaggccaacccaacctt
caacctaaagcttggccgcattacttcacctacgcccgtgaatggcgcgacgccctgtcg
tccgaccaaggacgcgacgatgaagcacccttgccacccctggtggtgaccgaacctctg
aacctggccacgctgagcgatttcctggtcaacccggtggcggccttcctgcgacagcgg
ctgaacgtgcgtttcgaccgcgccttgcccaccagcgaagacaacgaagtattcgaactg
gacggcttgcagacctggcagttgcaggacgaactaagcgatcggctgcgcgactgggcc
gaaaccgatggcgacgagaccacccttgcgccgcgtctggcgcaggagatgcaacgcttg
cagcgtcaggggcgtttgccgatggcggctttcggtcaatttgcggctcggcgtctggaa
acgccattgcccgctttgctgtcgcgctatcgcgatgcattgcaggaatggaccacgccg
gtgccggggcagattgcgattcatcatgtctcgcgtaccgatcccgaactggtgattgaa
gactgggccgagggcttgcgtcgccatgtcgacggacgtctggcacgcgtacagctgatc
agcagcaagctgcatcaagggccaagcctgcgctggcatgtgttgctgcgccattgggtg
cggcacctggccttgcagaccattggtgaacccgttgccagcgtgctggtcagcatgacc
gacaccgtggtgttgaagcctgtggcagcaccaatcgccgcatctgaactggacaccttg
ctgggcgcgtggcgtgacggcatgcagcgcgctctgccggttgcctgcaagaccgcattt
gcatggttggaagatggcgactacgccgcgtcggttgcctacgatggtgcctacaaccgg
cccggcgaagccgcgcagtcggctgcgctggcacgggtctacgccgattatgcggcgctg
accgcagatggcactttcagcgaatgggcgcagaccttgtatgggccgctgctcaatacc
ttgggtcgcaaaagcgctgaccacagtgcagatgccgatgcaggcggggagcaatcgcaa
tga
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