Pigmentiphaga aceris: FXN63_06780
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Entry
FXN63_06780 CDS
T06198
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FXN63_06780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_06780
Enzymes [BR:
pacr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FXN63_06780
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FXN63_06780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QEI05580
UniProt:
A0A5C0AXL4
LinkDB
All DBs
Position
1633596..1635146
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AA seq
516 aa
AA seq
DB search
MSTRHRYEIADFEAWRRIARELLLAGVPPHDVDWLDVSDSGSHTLSLFESAGGDVSAARA
PAMKPNSSADLFSAADVSGADHQQMPSSDVAEHAAPVLRVSRQCLDVLRSAAMFRDAGRW
ALLYQALWRWQQGDQAAISPADSDGARIHVMVKAVQHEIHRMHAYVRFRETQGERPAGSP
QFIAWFEPVHEILRAGAPYFRQRMGRASWMIATPGGIAQCHGEDIEYGPPIPQPPPIDDA
GESLWLSYYQHTFNPSRVNARVMTQHMPVRYWKNLPEGKLIPGLVAQANAGSQQLGQTDS
VGARKGAPIRVSAARAMPVREAPRTLDTCTRCELGRHATQGVAGIGPRNASIMLVGEQPG
DQEDLQGTVFVGPAGQLLNQALEAATLSRDAIYLTNAVKHFKWEPRGKRRLHKTPAQQEV
DACRYWLEQELTEVAPKVIVTLGATALRSVLNHARIKLQDQRGRPLRHGDTWVIPTWHPA
YVLRVPDPRARTDALADIVAALRQAQALSESDVVAG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgagtacccggcatcgatacgaaatcgcagacttcgaggcctggcggcgtatcgctcgg
gaattgctgctggcaggcgtgccaccgcacgatgtcgattggctcgatgtcagcgattca
ggaagccatacgctttccttgttcgagtcggcggggggcgatgtttcggctgcgcgcgcg
cctgcaatgaaaccaaacagcagcgcagacttgttcagtgcggccgatgtgtcaggcgca
gaccaccagcagatgccgtcatcagatgtggctgaacatgctgcgccagtcttgcgtgtg
tcccgccagtgcctggacgtcttgcgctcggcggccatgttccgtgacgccggccgatgg
gccttgctgtatcaggccttgtggcgttggcagcaaggcgaccaggctgcaatctcgccc
gccgattcggacggcgcgcgcattcacgtaatggtcaaggcggttcaacacgaaattcat
cgcatgcatgcctacgtgcgctttcgtgaaactcagggtgagcgcccggccggttcgccg
cagttcattgcctggttcgagccagtgcatgaaatcctgcgggcaggggccccgtatttc
cgacagcgcatgggccgcgccagctggatgatcgcgacccctggcggtattgcccaatgc
cacggcgaagacatcgaatacggcccacccatcccgcaaccgccgcctatcgacgatgcc
ggtgaaagcctgtggttaagctactaccagcatacgttcaacccctctcgcgtcaacgcg
cgggtgatgacgcagcacatgcctgtgcgttattggaagaacctgcccgagggcaagctg
atcccgggtctggtggcgcaagccaacgccggatcacaacaactggggcagaccgactcg
gtaggggccagaaaaggcgcaccgattcgtgtgtcggccgcgcgcgccatgccggtacgt
gaagcgccgcgcacgcttgatacctgcacgcgctgcgaactgggacgccacgccacgcag
ggcgtcgcaggtatcgggccgcgcaatgccagcatcatgctggttggcgaacagcccggt
gatcaggaagaccttcaaggcaccgtgtttgtcgggccggcagggcagttgctcaatcag
gcgttggaagcggctaccctgtcgcgcgacgctatctacctgaccaacgccgtcaaacac
ttcaagtgggagccgcgcggcaagcgccggcttcacaagacgcccgcgcaacaggaagtc
gatgcctgtcgttattggttggagcaagaattgaccgaggttgcacccaaggtcatcgtc
acgctgggggccacggctttgcgcagcgtgttgaatcacgctcgcatcaagctgcaggat
cagcgagggcggccgttgcgtcacggtgatacgtgggtgatacctacttggcatccggcc
tatgtactgcgcgtgccagaccctcgtgcacgcaccgatgcgctggccgacatcgttgct
gccttacgccaggcgcaggccttatccgagtcggatgtggtggcaggataa
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