Pigmentiphaga aceris: FXN63_12840
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Entry
FXN63_12840 CDS
T06198
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FXN63_12840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacr03021
]
FXN63_12840
Transcription machinery [BR:
pacr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FXN63_12840
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
PhyR_sigma-like
HTH_28
Rv2175c_wHTH
HTH_24
HTH_3
HTH_31
HTH_11
Sigma70_r3
TnsD
GerE
HTH_Tnp_ISL3
Phage_terminase
HTH_AsnC-type
HTH_VMAP-M9
DUF2774
Motif
Other DBs
NCBI-ProteinID:
QEI06619
UniProt:
A0A5C0AW56
LinkDB
All DBs
Position
complement(2950402..2950911)
Genome browser
AA seq
169 aa
AA seq
DB search
MEAAAVPSQPYPHIDALYSEHQGWLQAWLRRKLGCSHRAADLAHDTFLRLLTSRMPADLD
EPRAYLSTVARNVLLNHQRRQKLEQAWLAELALVPEALVPSEEDRAIMLETLLAISVLLD
GLSIKARRAFLLSQLDGLTYAEIAAELGVSASRVRQYMADALTRCYAAL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgccgccgtgccatcccagccctacccgcacatcgacgcgctctacagcgag
catcagggctggttgcaggcttggctgcgccggaaactgggctgcagccatcgcgcggcc
gaccttgcgcacgacacatttctgcggttgcttacctcgcgcatgccggccgatctggac
gagccgcgcgcctatttgagtaccgttgcgcgcaacgtgctgttgaatcatcagcgacgc
cagaaactcgaacaagcttggttggcagaactagcgctggtgcccgaagcattggtgcca
tcagaagaggaccgggcgatcatgttggaaacgctgcttgccatcagcgttctgctcgat
ggtctgtcgatcaaagcacgacgtgctttcctgctcagccaactggacgggctgacctat
gccgaaattgccgccgaactcggtgtatcggccagccgcgtccgtcagtacatggccgac
gccctgacacgttgttatgcggcgctttga
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