Pigmentiphaga aceris: FXN63_13905
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Entry
FXN63_13905 CDS
T06198
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03030
DNA replication
pacr03430
Mismatch repair
pacr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FXN63_13905 (holB)
03430 Mismatch repair
FXN63_13905 (holB)
03440 Homologous recombination
FXN63_13905 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacr03032
]
FXN63_13905 (holB)
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_13905 (holB)
Enzymes [BR:
pacr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FXN63_13905 (holB)
DNA replication proteins [BR:
pacr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FXN63_13905 (holB)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FXN63_13905 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QEI06806
UniProt:
A0A5C0AYM3
LinkDB
All DBs
Position
complement(3201302..3202369)
Genome browser
AA seq
355 aa
AA seq
DB search
MSLAVVPPWYAQTAQQWLSQRERFAHAWLIHGLAGTGKVDFARAAAAALLCESPRGHLAC
GVCPACVWMSSGNHPDFRRIRPDAVAQEEGDEEAGENEDGEAPAVDVVARASKKAPSKEI
RVEQIRAMEAWATTGTHRGGLRVVVLYPADSLNVVSANALLKILEEPPPATVFLLVSNAP
DRLLPTLISRCRRLPLPVPAPDVALAWLTAQGADDAAGRLAANGGAPMGAWRSFQAEIPA
RPVWLGDLIDTLAAGRSPDVGAMVELLEKQPPAHWLDALQRMTVDIALIQAGAGARYYPS
ASGALERIGTSAGRVSIAELGRWLQRQQGISGHPLNGRLFAHETLLRVVEAVRGR
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggcggtggttcccccttggtatgcgcagacagcgcagcaatggctgtcgcag
cgtgaacggtttgcccatgcgtggctgattcatggcttggctggcacgggcaaagtcgat
tttgcccgggcggcagcagcggcattgctgtgcgaatcgccgcgcggccacttggcgtgt
ggcgtgtgtccggcctgtgtgtggatgtccagcggcaaccatcccgactttcgacgtatc
cggccagacgcagtggcgcaggaagagggcgacgaagaagccggtgagaacgaggatggc
gaggcacccgcagtggatgtggtggcgcgtgcatccaagaaggccccgtccaaggaaatc
cgggttgagcagatccgggcgatggaggcctgggctactaccggtacgcaccggggtggt
ttgcgggttgtggtgctgtatccggccgacagcctgaatgtggtgtcggcgaatgccttg
ctgaagattctggaagaaccgccaccagctacggtatttttgttggtcagcaatgcgcct
gatcgactgttgccgactttgatttcgcgttgccgtaggttgcctttgccggtgcctgcg
ccggatgtggcgctggcatggctgactgcgcaaggtgccgacgatgcggccggccggctg
gccgccaacggtggtgctccaatgggtgcgtggcgcagcttccaggctgaaatcccggcg
cgcccggtgtggcttggcgatctgatcgataccctggctgccggccgcagcccggatgtc
ggagcaatggtcgaactgctggaaaagcagccgcccgcgcactggttagacgccttgcag
cgcatgacggtggatatcgccttgatccaggcgggtgcgggtgcacggtattacccgagt
gcatcgggtgcgttggagcgtatcggtaccagtgctggccgggtgtcgattgctgagctt
ggtcgttggttgcaacggcagcagggtatttctggtcatcctttgaatggtcgcttgttc
gcccacgaaacgctgctgcgcgtggttgaggctgtacgggggaggtga
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