Pigmentiphaga aceris: FXN63_15395
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Entry
FXN63_15395 CDS
T06198
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FXN63_15395 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacr03019
]
FXN63_15395 (pnp)
03016 Transfer RNA biogenesis [BR:
pacr03016
]
FXN63_15395 (pnp)
Enzymes [BR:
pacr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FXN63_15395 (pnp)
Messenger RNA biogenesis [BR:
pacr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FXN63_15395 (pnp)
Transfer RNA biogenesis [BR:
pacr03016
]
Prokaryotic type
tRNA degradation factors
FXN63_15395 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
OB_RRP5_4th
S1_RRP5
DUF5813
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
QEI09344
UniProt:
A0A5C0B5E8
LinkDB
All DBs
Position
complement(3549035..3551176)
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AA seq
713 aa
AA seq
DB search
MFNKVTKSFQYGQHTVTLETGEIARQASGAVVVSIEDTVVLATVVARTSAKPGQDFFPLT
VDYIEKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPLRPLFPEGFYNEVQVVIHTLSV
NPEIDPDIAAMIGASAALAISGIPFNGPIGAARVGYIDGQYVVNPTASQLKTSDLDLIVA
GTESAVLMVESEAKQLSEEVMLGGVVFGHEQSQAVINAIHDLVAEAGKPEWEWTAPAKNE
PLIAKVKELAQAGLEAAYQTREKQARTVQLRALTTTVKAQLAEQAAAAGESTPDNVLVDN
ILFDIEAQIVRGQILAGEPRIDGRDTRTVRPIEIRLGVLPRAHGSALFTRGETQALVIAT
LGTKQDEQIIDALMGEYRDRFMLHYNMPPFATGETGRIGVPKRREIGHGRLAKRSLVSLL
PEPADFQYTIRLVSEITESNGSSSMASVCGGSLAMMDAGVPVKDHVAGVAMGLIKDGGKF
AVLTDILGDEDHLGDMDFKVAGTVNGVTALQMDIKIQGITKDIMQVALAQAREGRLTILE
KMREALGSAHGELSQFAPRMLSMKINPEKIRDVIGKGGATIRALTEETGTQIDISDDGTI
VISSADLDRAREAQRRIADLTADVEVGQVYEGSVLRLLDFGAIVQVLPGRDGLLHISEIA
NHRIANINDVLKVGQQVRVKVIEADDKGRLRLSIKAIAPLAAPEAAPAAPAQE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaataaagtcacgaaatcattccagtacggccagcacaccgtcaccctcgaaacc
ggcgaaatcgctcgccaggcttcgggtgctgtggtggtctctatcgaagacaccgtggtg
ctcgccaccgtggtcgcacgcaccagcgccaagcccggccaggacttcttccccctgacc
gtcgactacatcgaaaagacctacgcagccggccgcattccgggtggtttcttcaagcgt
gaaggcaagccttccgaaaaggaaaccctgacctcgcgcctgatcgaccgtccgctgcgt
ccgctgttcccggaaggcttctacaacgaagtccaggtggtgatccacaccctgtccgtg
aacccggaaatcgaccccgacatcgctgcgatgatcggtgcatcggctgcgctggccatc
tcgggcattccgttcaacggcccgatcggtgccgcacgcgtgggttacatcgacggccag
tacgtcgtgaacccgaccgcttcgcaactgaagacctctgacctggacctgatcgttgcc
ggtaccgaatccgccgtgctgatggtggaatcggaagccaagcagctgtcggaagaagtg
atgctgggcggtgtggtgttcggtcacgaacaatcgcaagccgtcatcaatgccattcac
gacctggttgccgaagccggcaagccggaatgggaatggaccgctccggccaagaacgag
cccctgatcgccaaggtcaaggaactcgcgcaagctggtctggaagccgcttaccaaacc
cgcgaaaagcaagctcgcaccgtgcaactgcgcgccctgaccaccacggtcaaggctcag
ctggccgagcaagctgctgccgccggtgaatccaccccggacaacgtcctggtcgacaac
atcctgttcgacatcgaagcgcaaatcgtccgtggccagatcctggctggcgagccgcgt
attgacggtcgcgacacccgcaccgttcgcccgatcgaaatccgtctgggcgtgctgccg
cgcgcacacggctcggcgctgttcacccgtggtgaaacgcaggccctggtgatcgccacc
ctgggtaccaagcaagacgagcagatcatcgacgccctgatgggcgagtaccgtgaccgc
ttcatgctgcactacaacatgcctccgttcgccaccggcgaaaccggtcgcatcggcgtg
ccgaagcgtcgcgaaatcggccacggccgtttggccaagcgttcgctggtgtccttgctg
ccggaaccggcagacttccagtacaccattcgcctggtgtcggaaatcaccgaatcgaac
ggttcctcgtcaatggcatcggtctgcggcggctcgctcgccatgatggacgcaggcgtc
cccgtcaaggatcacgtggccggtgtggccatgggcctgatcaaggacggcggcaagttc
gccgtgctgaccgacattctgggtgacgaagatcacctgggcgacatggacttcaaggtt
gccggtaccgtcaatggcgtgaccgcactgcagatggacatcaagatccagggcatcacc
aaggacatcatgcaggtcgcgctggcacaagcccgcgaaggccgcctgaccatcctggaa
aagatgcgcgaagccctgggctcggcccacggtgaactgtcgcagttcgccccgcgcatg
ctgtcgatgaagatcaacccggaaaagatccgtgacgtgatcggcaagggtggcgcaacc
atccgtgcactgacggaagaaaccggcacccagatcgacatctcggatgacggcaccatc
gtcatctccagcgccgatctggaccgtgcccgcgaagcacaacgtcgcatcgccgacctg
accgctgacgtcgaagtcggccaggtctacgaaggcagcgtgctgcgtctgctggacttc
ggtgccatcgtgcaagtgctgccgggccgtgacggcttgctgcacatctcggaaatcgcc
aaccaccgcatcgcgaacatcaacgatgtgctgaaggtcggccagcaagtccgcgtcaag
gtcatcgaggctgacgacaagggccgtctgcgtctgtcgatcaaggcgattgcaccgctg
gctgccccggaagcggcaccggctgccccggcacaggaataa
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