Pigmentiphaga aceris: FXN63_17620
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Entry
FXN63_17620 CDS
T06198
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03030
DNA replication
pacr03430
Mismatch repair
pacr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FXN63_17620 (dnaE)
03430 Mismatch repair
FXN63_17620 (dnaE)
03440 Homologous recombination
FXN63_17620 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacr03032
]
FXN63_17620 (dnaE)
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_17620 (dnaE)
Enzymes [BR:
pacr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FXN63_17620 (dnaE)
DNA replication proteins [BR:
pacr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FXN63_17620 (dnaE)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FXN63_17620 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QEI07453
UniProt:
A0A5C0B158
LinkDB
All DBs
Position
complement(4070509..4074000)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSSVAQNSPFVHLRVHSEFSVVDGTVRIDDLVSRVAEMGQPAVALTDLSNLFGLVKFYNA
ARGKGVKPIAGCDVWVTNENDLAKPYRLLLLARTHQGYLNLCELLSRAFLRNQERGRAEV
LPEWFAELGEGLIVLSGGRNGEVGRALEDGNVPAALAAARVWSARFPGAFYIELQRAGHD
GDERYVQAALHLAVQAQLPVVATHPIQFLEQDGFMAHEARTCISEGEQLGNPKRVRRFTQ
EQYLLTSEDMQRKFADIPSALANTVQIAQRCNLSLVLGKPQLPDFPTPDGVSLDDFLIQL
SEEGLEKRMAFLFPDEAERESKRAQYYERLRWECKTIIQMGFPGYFLIVQDFINWGKNNG
VPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRERVI
DYVKEKYGRQAVSQIATFGTLGAKAVVRDAGRVLDMPYLFCDGLSKLIPFNPMDPWTLER
TLKDEPAFKERYEQEEEVRSLVDLAKPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPG
QENSAVSQFDKDDVEAVGLVKFDFLGLRNLTILDWAVRYVRQFNENKRDFDVMALSLDDP
AVYKLLSEGNTTSVFQLESRGMKELLKKLRPNTFEDIIAMLALYRPGPLESGMVDDFVNR
KHGRASVDYFHPDLESTLKSTYGVIVYQEQVMLISQIIGGYSLGGADLLRRAMGKKKPEE
MAKQRVMFEEGAKQKGHDPKLAVNLFDLMEKFAGYGFNKSHSAAYALISYQTAWLKAHHP
AEFLAATMSSDMDATDKVQVFCRDAQENGVEVLPPDVNYSGYRFEPVADVHTKKGLPPRT
MRYGLGAVKGTGQGAVEDILRARKEGGAFKSLFDFCRRVSKQSVNRRTIEALIKAGAFDT
IEPNRAAMLASVPLAMEGAEQAARAASQVSLFGGDDHDDLTGELVKVDPWDMREQLTQEK
LALGYFFSGHLFDSYRDEVRRFVRTPLNKMQPNRELQWLAGVLTAVRVQMTRRGKMLFAV
LDDGTAQVEISIFNELFEQHRSKLREDQLLVVHGKVSNDEYSGGTRIVAENLFDLQLARE
ANARALRITLNGNADADRLRQMLNPFRAEPENGLPGTPVEIRYSRGDARCVVRLDESWRV
RLSDTLIQQLGKWVQPDGVELTY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgtagcgcaaaactcccccttcgttcacctgcgcgtccactccgagttctcg
gttgtcgacggcacggtgcgtattgacgacctggtcagccgggtggccgagatgggccag
cccgccgtcgccctgacggacctgtccaacctgttcggtctggtcaagttctacaacgcg
gcgcgcggcaagggcgtcaagccgattgccggctgcgatgtctgggtgaccaacgagaac
gatctcgccaaaccgtatcggctgctgctgctggcgcgtacgcaccagggttacctgaac
ctgtgcgaactgctcagccgcgccttcctgcgcaaccaggaacggggccgcgcagaggtc
ttgcccgaatggttcgcggaactgggcgagggtttgatcgtgctgtccggcggtcgtaat
ggtgaagtggggcgtgcgctggaagacggcaatgtgccggctgcgctcgccgctgcgcgt
gtctggtcggcacgttttcccggggccttctatatagagttgcagcgcgcgggccacgat
ggtgacgaacgctacgtgcaggccgcgttgcatctggcggtgcaggcgcaactgcccgtg
gtcgccacgcaccccatccagttcctggagcaagacggcttcatggcgcacgaggcccgc
acctgcatttccgagggcgagcaactgggcaatccgaagcgcgtgcgccgcttcacccaa
gaacaatacctgctgacgtctgaagacatgcagcgcaagttcgccgacattccctcggcg
ctggccaatactgtgcagattgcgcagcgctgcaatctgagcctggtgctgggcaagccg
cagttgcctgacttcccgacccccgatggcgtgtcgctggacgacttcctgatccagctg
tcggaagaagggctggaaaagcgcatggccttcctgttccccgacgaagcggaacgggaa
tcgaagcgcgcgcagtattacgaacgcctgcgctgggaatgcaagaccatcatccagatg
ggcttccccggttacttcctgatcgttcaggacttcatcaactggggcaagaacaacggc
gtaccggtggggccgggccggggctcgggtgcaggctcgctggtggcctatgcgctgggc
attaccgacctggacccgatccgttatgacttgctgttcgagcgattcctgaatcccgaa
cgcgtctcgatgcctgactttgacatcgacttctgccaggacaaccgcgaacgcgtcatc
gactacgtgaaggaaaagtacggtcgccaggccgtgagccagatcgccaccttcggtacc
ttgggtgccaaggccgtggtgcgtgacgccggtcgtgtgctggacatgccttacttgttc
tgcgacggcttgtccaagctgatcccgttcaatcccatggacccgtggacgctggaacgc
acactgaaggacgagccggccttcaaggaacgctacgagcaggaagaggaagttcgctcg
ctggttgacctggccaagccgctggaaggcctgacccgaaacatcggcatgcacgcaggc
ggtgtgttgatcgccccgggcaagcttactgatttctgcccgctgtattgccagccgggg
caggaaaacagcgcggtgtcgcagttcgacaaggacgatgtggaagccgtcggcctggtg
aagttcgacttcttgggtctgcgaaatctgacgattctggattgggccgtgcgctacgtg
cgccagttcaacgagaacaagcgcgacttcgatgtgatggccttgtcgctcgacgacccg
gccgtctacaagctgctgagcgagggcaacaccacttcggtattccagctcgaatcgcgc
ggcatgaaggaactgctgaagaagctgcgcccgaatactttcgaagacatcatcgcaatg
cttgcgctgtatcgtcccggcccgctggaatcgggcatggtggacgacttcgtgaatcgc
aagcacggtcgtgcatcggtggattatttccaccccgacctggaaagcacgctgaagagc
acctatggggtcatcgtctaccaagagcaggtgatgctgatctcgcagatcatcggcggc
tattcgctgggcggtgccgacttgctgcgccgcgccatgggcaagaaaaagcccgaggaa
atggccaagcagcgggtgatgttcgaagagggtgccaagcaaaagggccacgacccgaag
ctggcggtgaacctgttcgacctgatggaaaagttcgcaggctacggcttcaacaagtcg
cactcggccgcttacgccctgatttcctaccagaccgcgtggctgaaggcccatcacccg
gccgagttcctggccgccaccatgtcgtccgatatggacgccaccgacaaggtgcaggtg
ttctgccgtgatgcgcaggaaaacggcgtcgaggtcttgccgcccgatgtgaactattcg
ggctaccgcttcgagccggttgccgacgtgcacaccaagaagggcctgccgccgcgcacc
atgcgttacggtctgggtgcagtgaaaggcacgggccaaggcgcagtggaagacattctg
cgtgcccgcaaggaaggtggcgcgttcaagagcctgttcgatttctgccgtcgcgtcagc
aagcagagcgtgaaccgtcgcaccatcgaagccctgatcaaggcaggtgctttcgacacc
atcgaaccgaatcgcgcggccatgctggcatctgtgccgctggcgatggaaggtgccgaa
caggcggcacgtgccgccagccaagtgtcgctcttcggtggcgacgaccatgacgatctg
accggtgagctggtcaaggtcgacccctgggacatgcgtgaacaattgacccaggaaaag
ctcgcgctgggttatttcttcagcggccacctgttcgattcgtatcgcgatgaggttcgt
cgcttcgtgcgcacaccgctgaacaagatgcagcccaaccgcgaattgcaatggctggca
ggcgtgctgacggcggtgcgggtgcagatgacccgtcgcggaaaaatgctgtttgcggtg
ctggacgacggcacggcacaggtggaaatctcgatcttcaacgagctgttcgagcagcat
cgcagcaagctgcgcgaagaccagttgctggtggtgcatggcaaggtcagcaacgatgaa
tattcgggcggcacgcggatcgtggccgaaaatctgttcgatctgcagttggcgcgcgag
gccaatgcacgtgcgctgcgcattaccttgaatggcaatgcagatgctgatcgcctgcgg
cagatgcttaatccgttccgtgcagaacctgaaaacggcttgcccggtacgccggtcgaa
atccgctattcgcgtggcgatgcgcgctgcgtggtcaggcttgatgaatcgtggcgggtg
cgtttgtccgacacgctgattcagcagctgggcaagtgggtgcagcccgacggcgtggag
ctgacatattga
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