Pigmentiphaga aceris: FXN63_23840
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Entry
FXN63_23840 CDS
T06198
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXN63_23840 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_23840 (uvrA)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXN63_23840 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FXN63_23840 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
BCA_ABC_TP_C
AAA_23
AAA_33
AAA_21
Viral_helicase1
ATPase
Motif
Other DBs
NCBI-ProteinID:
QEI08529
UniProt:
A0A5C0B183
LinkDB
All DBs
Position
5536923..5539766
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AA seq
947 aa
AA seq
DB search
MDVIRIRGARTHNLKNISLELPRHQLVVMTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMDKPEVDLIEGLSPAISIEQKAAGHNPRSTVGTVTEIHDYLRLLFARVGTPFC
PDHHVPLRAQSVSQMVDNAMAMAADTRLMILAPIARDRKGSFEDDFARLQAQGYVRFRVD
GQILEVESLPELKKTEKHDIDVVIDRLRVKPESKQRLAESFETAITLADGRAIALDMDSG
HEQLFSNRYACPICSYSLPELEPRLFSFNNPVGACPSCDGIGHVGFFDPKRVVAFPELSL
GSGAIKGWDRRNPFYHQLLTNLAAYYDFEIDTPFEELDPTTQERVLFGSGEEEIPFTYLN
EKGKASVKVHTFEGVIPNLERRWKETESATVREELGKYRNVKTCPDCGGSRLRAEARNVF
VGEDAAKQAIFEVEAMQLAECLRWFETLELHGAKKEIADRIVREIISRLSFLNNVGLSYL
SLDRSADTISGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIETLRHLRNLG
NSVIVVEHDEDMIRAADWVVDMGPGAGEHGGRIVAEGTPAQILDNPESLTGRYLNGVLSI
AVPNRRPVKDQEELGWLALNGCTGNNLKSADLRIPLGRLVCISGVSGSGKSTMINDTLVN
VVSRHLYNSQAEPAPYESIEGLDQFDKIISVDQSPIGRTPRSNPATYTGMFTPIRELFAG
VPESRARGYDPGRFSFNVKGGRCESCQGDGVVKVEMHFLPDIYVPCDVCHGSRYNRETLE
IRYRGRSISEVLDLTVEQALTYFDAVPTIARKLQTLADVGLGYIRLGQSATTLSGGEAQR
VKLSLELSKRDTGRTLYILDEPTTGLHFHDIALLLKVINQLVEAGNTVVVIEHNLDVIKT
ADWVVDMGPEGGDGGGRVVAQGTPEDIAGSTDSHTGKYLAQVMKIRQ
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcattcgtatccggggtgctcgcacccacaatctcaagaacatctcgctcgag
ctgcctcgccaccagcttgtggtgatgacggggctatccggctcgggaaaatcctcgctc
gcgttcgatacgctgtatgccgaagggcagcgcagatacgtggaaagtctgtctgcgtac
gcgcgccagttcctgcagctgatggacaagcccgaggtcgatctgatcgaggggctgtcg
cctgcgatctcgatcgagcagaaggctgccggccataacccgcgctcgactgtgggcacg
gtgaccgagatccacgattacctgcgactgttgtttgcacgcgtcggcacgcctttttgc
ccggatcatcacgttccgctacgagcgcaaagcgtcagccagatggtggacaacgcaatg
gccatggccgccgatacgcggctgatgattcttgcgccgatcgcgcgcgaccgcaaaggc
agcttcgaagacgatttcgcccgcttgcaggcgcaggggtatgtgcgtttccgtgtcgat
gggcaaattctggaagtggaatcgctgccggaactgaaaaagaccgaaaaacacgacatc
gacgtggtgatcgaccgcctgcgtgtcaaacctgaatcgaagcagcgtctggccgaaagt
ttcgagactgcgatcacgctggcagacggccgcgctattgcgctggatatggatagcggc
cacgagcagctgttctccaatcgctacgcctgtccgatttgcagttacagcctgccggaa
ctcgaaccgcgcctgttcagcttcaacaacccggtgggtgcctgcccgtcttgcgacggt
attggccatgtgggcttcttcgacccgaagcgcgtggtggctttcccggaactgagcctt
ggcagcggtgccatcaagggctgggaccgtcgcaacccgttctatcaccagttgctgacc
aatctggcggcgtattacgacttcgagatcgacacccccttcgaggaactggacccgacc
acgcaggaacgggtgttgttcggctcgggcgaagaggaaatcccgttcacgtacttgaac
gagaagggcaaagccagtgtgaaggtgcacacctttgaaggtgtgattcccaatctggaa
cgccgctggaaggaaaccgagtcagccacggtgcgcgaagagctgggcaagtatcgcaac
gtgaagacctgccccgactgcggcggttcacgtctgcgggccgaagcacgcaatgtgttc
gtgggcgaagatgcggccaagcaggcgatttttgaagtggaagccatgcagttggccgag
tgcctgcgctggttcgaaacgctggaactgcacggtgcgaagaaggaaattgccgaccgc
atcgtgcgcgaaatcatctcgcgcctgtccttcctgaataacgtgggcctgagctatctg
tcactggatcgcagtgccgacaccatttccggtggtgaggcgcagcgcattcggctggcc
agccagatcggttccggcctgaccggcgtgatgtatgtgctggacgagccgtccatcggt
ctgcaccagcgcgacaacgatcgtctgatcgaaacgctgcgccacctgcgcaacctgggc
aacagcgtgattgtggtcgaacacgacgaagacatgatccgcgccgccgactgggtggtg
gacatgggaccgggcgcgggcgaacacggtggccgcatcgtggcagaaggcacacccgcg
cagattcttgataacccggaatcgctgaccggccgctatttgaatggcgtgctgtccatt
gcggtgcccaatcgccgcccggtgaaagaccaggaagaactgggctggctggccttgaac
ggctgtaccggcaataacctgaagtcggccgatctgcgcattccgctgggtcgcctggtg
tgtatcagtggcgtgtcgggttccggcaagtccaccatgatcaacgacaccttggtcaat
gtggtgtcgcgccacctgtacaacagccaggccgagccggcgccctacgaaagcattgaa
gggctggatcagttcgacaagatcatcagcgtcgatcagtcgcccatcggccgtacaccg
cgcagcaatccggccacttataccggcatgttcacgccgatccgcgaactgttcgcgggc
gtgccggaatcgcgtgcgcgtggctacgaccccggccgcttcagcttcaacgtgaagggc
ggtcgttgcgagtcctgccagggcgatggcgtggtgaaggtggaaatgcacttcctgccc
gacatctacgtgccttgcgacgtgtgccacggcagccgctacaaccgcgaaacgctggaa
atccgctatcgcggccgcagcatcagcgaggtgctcgacctgaccgtcgagcaggcgctg
acctatttcgacgccgtgcccacgattgcccgcaagctgcagacgctggccgatgtgggt
ttgggttatatccgcctgggccaaagcgccaccacgctgtcgggcggcgaggcgcagcgg
gtgaagctgtcgctggaattgtccaagcgcgataccgggcgcaccttgtacatcctggat
gaaccgaccaccggtttgcacttccatgacattgccttgctgctgaaggtcatcaaccag
ttggtggaagccggcaatacggtggtggtgatcgaacacaatctggatgtgatcaagacc
gcagactgggtggtcgacatgggcccggaaggcggcgatggcggtggccgcgtggtggct
cagggcacgcctgaagatatcgctgggtcgactgacagtcacaccggcaaatatctggcg
caggtaatgaaaattcgtcagtaa
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