Pigmentiphaga aceris: FXN63_25100
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Entry
FXN63_25100 CDS
T06198
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pacr
Pigmentiphaga aceris
Pathway
pacr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pacr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FXN63_25100 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pacr03021
]
FXN63_25100 (rpoA)
03400 DNA repair and recombination proteins [BR:
pacr03400
]
FXN63_25100 (rpoA)
Enzymes [BR:
pacr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FXN63_25100 (rpoA)
Transcription machinery [BR:
pacr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FXN63_25100 (rpoA)
DNA repair and recombination proteins [BR:
pacr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FXN63_25100 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QEI08760
UniProt:
A0A5C0B5Y5
LinkDB
All DBs
Position
complement(5835917..5836903)
Genome browser
AA seq
328 aa
AA seq
DB search
MANAAFLKPRNIDVEAVGPNHAKVIMEPFERGYGHTLGNALRRILLSSMAGYAPTEVQIT
GVVHEYSTIDGVREDVVDILLNLKGVVFKLHNREEVSLTLRKQGPGAVTAADIELSHDVE
IINPNHVIATLTDSGKLEMQIKIEKGRGYVPGNLRGFADDHSRAIGRIVLDASYSPIRRV
SYSVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMEQLSVFAALEGSTETIEA
PARGTPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgccgctttcttgaagccgcgcaacatcgacgtcgaagccgtcggccccaat
cacgccaaagtgatcatggaaccgttcgagcgcggctacggccacacgctcggcaatgcg
ctgcgccgcatcctgctgtcttcgatggccggctatgcccccaccgaagtgcagatcacc
ggtgtcgtgcacgagtactcgacgatcgatggcgtccgtgaagacgtggtcgacatcctg
ctgaacctgaagggcgtcgtcttcaagctgcacaaccgtgaagaagtctcgctgacgctg
cgcaagcaaggtcctggcgcggtcaccgctgccgacatcgagctgtcgcacgacgtcgag
atcatcaacccgaatcacgtcattgccaccttgaccgacagcggcaagctggaaatgcag
atcaagatcgaaaagggccgtggctacgtcccgggtaacctgcgcggcttcgccgacgac
cacagccgtgcaatcggccgtatcgttctggacgcctcgtacagcccgatccgccgcgtc
agctactcggtcgaaagcgctcgcgtcgagcagcgtaccgatctggacaagctggttctg
gacatcgaaaccaacggcgtgatttcgcccgaggaagccgtgcgccagtcggctcgcatc
ctgatggaacagctgtcggtgttcgctgcactggaaggctcgaccgaaaccatcgaagca
cctgctcgtggcacgccgcagatcgatccgatcctgctgcgtccggttgacgatctggaa
ctgacggtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggcgacctg
atccagcgtaccgaaaatgaactgctgaagaccccgaacctgggccgcaagtccttgaac
gaaatcaaggaagtgttggctgcacgtggtctgacgctgggcatgaagcttgagaactgg
cccccgctgggcctcgagcgtccgtaa
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