Paraburkholderia acidisoli: FAZ98_00600
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Entry
FAZ98_00600 CDS
T07287
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
FAZ98_00600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
Cas3-like_C_2
ResIII
GAS
Motif
Other DBs
NCBI-ProteinID:
QGZ60352
UniProt:
A0A7Z2JCS3
LinkDB
All DBs
Position
1:complement(135309..141644)
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AA seq
2111 aa
AA seq
DB search
MQPLIVAQQVTTGVADFLRTAFPSTTPGFVGLLERFLAERDNILKGPYLTVPLPFRKQAN
AGRAPFSWLPAGFVPHAHQARAFARLVGEDAQSTLVATGTGSGKTECFLYPILEHCRAAR
AEGRRGVKAIILYPMNALAGDQAGRVAKEIVKAAGLTGIRAGLYVGDTPAVDSDVVQQLD
EKTFTVITDRNALRSAPPDILLTNYKMLDFLLIRAADAPLWAHQQPDTLRYLVVDELHTF
DGAQGTDLACLIRRLKGRLNCPPGQLVCVGTSATLGDEGVGDLLSFAGDVFGETLDERAV
IAEDRESVGAYLAEAVVEFTRSPQPTDIALLAPENFDDIPAYLAVQAALWFAQPCSAEQV
RDFGWRCALGELLKSHFAFQNLLRDLERLGPKSVLLDDLLALLKRRLPASEEERYPLLWL
SSLLALVAHARKPGPQDFFLQVKVEIWLRELRRMVAALDIEPVLRHHDDLAKTDQGQVYL
PVLHCRDCNATGWGATLTKTSPNQLGADLRAFYSAFFAEDVATRFLFPATESAQPKVFER
KRVCPKCGTLHQLAQVECSHCGHGVLHAVDLTANLREVTRNGAKLTKSNHDCPYCSGYNS
LTIVGSQAASLAAVMLGQLFASRFNADKKLIAFSDSVQDAAHRAGFLAARTWRLNLRPAL
TQVIAAAHEAGQPLTLADLPKAFEQRWRDGTGDAQYVANFLPPQLHWLRDFETLMSEGAL
PENSDLLRLLGRVLPWVINAEFGQDAHVGRTLMATGTASVLPSEGALEAAADWLLPRLRE
QLDELAGTSPQEALVFLRGLVEEMQRSGAWRDNGLAFYARMGCSPWVYKKNPAESKMISG
PRPPRFITLPEYQRCVSIGGSHAQLFRAWAFKALPVLHDLALGADALLMPLYRLALEALN
AARLVGFEQAEGHKHDIRVWGLEPAAFFVTLGGQKWRCGCCHAELLSGPTEELVGQPCRR
GDCRGLLEPDDARGDFYQKLYLHADIQRVVAHEHTGLLPRETREAVERNFKANSGRPGEL
NVLSATPTLEMGIDIGDLSSVLQCSVPPQQANYIQRAGRAGRSTGNALLMTMATSKPHDL
YFWDDPKDMIAGTVQAPGVFLNASAVLERQLTAFTLDCWVQEAGRAAQIPVEVRAVFSAI
ENQTTSRFPYPWLDYVEQNRATLLDRFLRLFNQGAQMPLSDSTQQWLTKFVDGGADASGS
LPWKIVHRLQGIAKDVAELKRQRERTVKEVDKLQALAVRGEEQEAELARLLQERSALSRL
IGSIEGKATLNVLTDEGLLPNYAFPEQGVLLRSIIVRESKTGGNTADPLTFEYERPGSSA
ITELAPNNTFYAEGRRVVVNQVDVSKIKPEAWRFCRQCAYAEPLSSGDPHAHCPRCGDTL
WRDSGRVREMLRLTTVFARTLDRDSRIADDSDERQRGFYVRQALVDSPPDAVKQAFVIDK
PDFPFGFEFLDRVTFREVNFGEQSPDASPMQIAGEELNRPGFTICPECGTLHRKRTAEEM
HRNHSAWCSRRKNPEASTQQCIFLYREFSSEGIRVFLPDVGFADTKESLMSFVAALELGL
ARRFRGAVDHLRIALDMRMAAGSDTPRTYLVIYDSVPGGTGYLKDLMRAPEPLLEVFELA
LHALNTCGCNQDNDADGCYRCVYRYHNSFDRKLISRRIAQKLLNDVTQFKGSLKPVTHLA
GQAPSNHLLESALEKRFVEALRHDHSGLRFQLSDALFKGKPGYQVQAGTRRWRLELQVNL
GQANGVVVPCKPDFVFWPDDANDDLPVAVFVDGWQWHKDIVLTDLAKRMALAKSGKFAVW
TLTWDDVDAVLQGKQAAAPSVWPSLFDDSATPVLQKLCAAQGIEVLQDFKARSPFAQLHR
RLASGSHVALRKLAMALAASLMVPAGDSAALQSMQDGDFWKRLDDLNLLPDLSQNRLSLR
QLGTALTLAVAIHPDQLKQIITGHVGVESEPCVVGHWQDVGLPDAERLLRWQQLWQLLNL
LLPLRGIWVGAADMPGLPAMQDCPVFNSHSAKLSPAWLEALEFAAQEVQDWAMALAELGT
DSPEPGYELMGDKGRVLAQAELAWPDQRVAVLLPSAETDAKVFAEHGWLIFIVDGGALPS
DLENTLMETKA
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgcagccattaatcgtcgctcagcaagtaaccacgggggttgcagattttctgcgcacc
gcctttccgtcgaccacgcctggatttgtcgggctattggagcgctttctggccgagcgc
gacaatatcctcaaaggcccatatctgacggtgccgctaccgtttcgcaaacaagcgaac
gctgggcgggcaccatttagctggctacctgcaggctttgtgccgcatgctcaccaagcc
cgtgcctttgcccgactcgtcggcgaagatgcgcagtcgacgctggtcgccaccggtacc
ggttcgggcaagacggagtgctttctttacccaattctggaacattgccgagcggcccgc
gctgaggggcgacgcggcgtcaaggcgatcattctctatccgatgaatgcgctggccggc
gatcaggccggacgtgtggccaaggaaatagtcaaagcagcagggctgaccggcattcgc
gccggcttatatgtgggcgatacaccggcggtggactcggatgtggtacagcagttggac
gagaagacctttacggtcattaccgatcgaaatgcgcttcgcagcgccccgcctgacatc
ctgctgaccaactacaagatgctggatttcctgctgattcgagcggccgatgcgccgctg
tgggcgcaccagcaaccggataccctgcgctacctagtggtagatgagctgcacaccttc
gacggcgcacagggcactgatcttgcctgcctgatccgccgtttgaaagggcggttgaat
tgtccgcccgggcaacttgtttgcgtgggcacctcagccacgttgggtgatgagggcgtt
ggcgatttgctgtccttcgccggagatgtgtttggtgaaacactggacgagcgggctgtc
atcgccgaggatcgcgaatcggtgggtgcctatttagccgaggcggtggtcgagttcact
cgaagtcctcagccgacggatatcgcattgctggcgccggagaatttcgacgatatacca
gcttacctggcagtacaggcagcactgtggtttgcccaaccctgctcggcggagcaggtg
cgggactttggctggcgctgtgcgttgggcgagcttctgaagtcccactttgcctttcaa
aacctgttgcgcgatttggagcggttagggcccaaatcggtactgctagatgacctgcta
gcgctgctgaagcggcgcctgccggccagcgaggaggaacgctacccgctgttgtggtta
tccagcttgctggcattggtggcccacgcgcgaaagccggggcctcaggatttcttcctg
caggtaaaagtcgaaatctggctgcgcgagctgcgtcgcatggtggcggcactggacatc
gagccggtgctcagacatcacgatgatctggccaagaccgatcagggacaggtttatttg
ccggtcttgcactgccgcgactgcaacgcgacaggctggggcgccaccctgacgaagact
agccccaatcagctgggcgccgatctgcgcgcgttctatagcgcgttctttgccgaggac
gtagcgacgcgctttctgtttcctgcgaccgagagtgcccagcccaaggtgttcgagcgc
aagcgagtttgcccgaagtgtggcactttgcatcagctggctcaggtcgaatgctcgcat
tgcggtcatggggttttgcacgcagtggatttgacggcgaatctacgtgaagtcacacga
aatggcgccaaacttaccaagtccaatcacgactgcccgtactgctcgggctacaactcg
ctgaccattgtcggatcgcaagccgccagcctggccgcagtaatgctgggccagctgttt
gcctcccgctttaacgcagacaaaaagctgatcgccttctctgactcggtccaggatgcc
gcgcatcgtgccgggttccttgccgcgcgtacctggcgcctaaaccttcgcccagcgttg
acgcaggtcattgcagcggctcacgaggctggccagccgctgaccttggcagatttgcca
aaggcatttgaacaacgctggcgtgacgggacgggtgatgcccagtatgttgccaatttc
ctacctcctcagctccattggctgcgtgatttcgaaaccctaatgagtgagggtgcgcta
cccgaaaacagcgatctgctacgtttgcttgggcgagtactgccttgggtaatcaatgct
gaattcggccaggatgcgcatgtaggccgtactttgatggctactggtactgctagcgtc
ctgccaagcgaaggcgcgctggaagctgccgccgactggctgttgcctcgcctgcgcgag
cagcttgacgagttggccggcacatccccacaagaagctttagtgtttctgcgtggtttg
gtggaggagatgcagcgctctggggcctggcgggataatggcttggcgttttatgcccgt
atgggttgtagtccttgggtgtacaagaagaatccggccgagtccaagatgatctctggc
ccgcgtccgccacgatttatcacgctgccagagtaccagcgctgcgtcagcatcggagga
agccatgcgcaactctttcgcgcttgggccttcaaggcccttccagttttgcatgatctc
gcccttggagctgatgcactgttaatgccgttgtatcgcctggcactggaagcgcttaat
gcagcaagattggttggctttgaacaagctgaagggcacaagcacgacatccgtgtttgg
ggactggagcctgcggccttctttgtcacattgggcggacaaaaatggcgctgcgggtgt
tgtcacgcggagcttctgtctgggccaactgaggagctagttggccagccctgtcgccgg
ggagattgtcgagggttgctggagcctgacgacgcgcggggtgatttctaccaaaagcta
tatctgcatgccgatattcagcgggtcgtagcccatgagcacaccggcctgctaccacgt
gaaacccgagaggcggtggagcgcaatttcaaggctaacagcgggcgccctggcgagctg
aacgtgttgtcggctacgccaacgttggaaatgggtatcgacatcggcgatctgtccagt
gtcttacagtgttcggtaccgccgcagcaggccaactatatccagcgcgcgggccgcgcc
ggtcgcagcaccggtaacgccttgttgatgaccatggcgaccagcaagccgcatgacctc
tatttttgggatgaccccaaagacatgattgcggggacggttcaagctcccggagtattc
ctcaatgcctctgcggtactagagcggcagttgactgcgttcaccttggattgttgggtg
caggaggctggacgcgcggcgcagatccccgtggaagttcgcgctgtgttcagcgccatc
gagaatcagacgaccagtcgttttccctatccctggttggactatgtcgagcagaatcgg
gcgacactgctcgatcgtttcctgcgtttgttcaaccaaggcgcgcaaatgcctttgagt
gatagcacgcagcagtggctaaccaaatttgtcgatggaggagcagacgcttccgggtca
ttgccctggaagatcgttcatcgcttacagggtattgcgaaggatgtcgcagagctcaag
cgccaacgcgagcgcacggtcaaggaagtcgacaagctacaggcactggcagtgcgcggc
gaagaacaagaagcggaacttgcgcgcctgcttcaggagcgcagcgcgctctcgaggctc
attgggagcattgaaggcaaagccacgctgaatgtgcttaccgatgaagggctgttgcct
aattatgcctttcctgaacagggagtgctgctgcgctcgatcatcgtgcgcgaatccaag
acaggtggaaataccgcagatccgctcacgttcgaatacgagcgccccgggtcgtcggcg
atcacagagctggcgcccaacaataccttttacgctgaagggcggcgggtggtagtcaac
caggtggacgtttccaagatcaaacctgaggcctggcgcttctgccggcaatgtgcctat
gccgagccgctctcttcgggcgatccccacgcacattgccctcgctgcggcgacaccctt
tggcgtgatagcggcagggtgcgcgagatgctgcgcctaaccacggtgtttgcacgcacc
ttggatcgtgacagtcgcatcgccgacgactcggatgagcgtcaacgtggtttctatgtt
cgccaggccttggtggacagcccgcctgatgcagtgaagcaggcctttgtgatcgacaag
cccgactttccctttggcttcgagttcctcgaccgggtgaccttccgcgaggtgaacttt
ggtgagcaatcgccagacgcatcacccatgcagatcgccggcgaagagttgaaccgacca
ggtttcaccatctgtcctgagtgtggcactttgcaccgtaagcgcacagctgaggagatg
catcgtaaccactctgcgtggtgctcacggcgcaagaacccggaggcaagcacgcagcaa
tgcattttcctgtaccgcgaattttccagcgaaggcattcgggtctttttgcccgacgtc
ggttttgccgatacgaaagagtcgctgatgagctttgtggcggctctggagttggggctg
gcacggcgctttagaggagcagtcgatcacctgcgcattgcactagatatgcgcatggca
gctggttcggacaccccacgcacctatctggtcatttacgacagcgtgcccggaggcacg
ggctatctaaaagacttgatgcgtgcccccgaaccattgctcgaagtgttcgagctagcc
ttgcacgcactcaacacctgcggttgcaatcaggacaatgacgccgacggctgttaccgc
tgtgtgtatcgctatcacaacagcttcgatcgcaagctcatttctcgccgcattgcacag
aaactgctgaacgacgtcacgcagttcaagggcagtttaaagcctgtcacccatctggca
gggcaggctcccagcaatcacttgctggaaagcgcactcgaaaaacgttttgtggaggca
ttacgccacgaccacagcgggctgaggtttcaactgagcgatgctctgtttaaaggaaag
ccgggctatcaggttcaggcagggacgcggcgttggcgtttggagctacaggttaacttg
gggcaggccaatggggtggtagtaccctgtaagccagacttcgtgttctggcctgacgac
gccaatgatgacttgcctgtggcggtattcgtggacggctggcagtggcacaaagacatt
gtgttaacggatctggccaagcgcatggcgttggccaagagcgggaagttcgccgtctgg
acattgacttgggatgacgtagacgcagtgctgcaaggtaagcaggcggcagctccatct
gtctggccgtcgttgttcgatgacagtgcgactccggtgcttcaaaaactttgcgctgca
cagggcatcgaggttctgcaggacttcaaggcgcggtcgccattcgctcagctgcatagg
cgtctggccagcggctcacatgtcgcgttgcgcaagctggcgatggcattggccgcgagc
ctgatggtcccggccggtgattcagctgccttgcaaagcatgcaggacggggacttttgg
aagcggcttgatgatctgaatttactacccgatttgagccaaaaccgccttagcctgcgc
cagctcggaacagcattgacacttgcagttgctatccacccggatcagctcaaacagatc
atcaccggccatgttggcgtcgagtctgaaccctgtgtagtggggcactggcaggacgtc
ggtttgccggatgccgagcggcttttacgttggcagcagctttggcagttgttgaacctg
ttgctgccgttgcgaggcatctgggttggtgcggccgatatgccgggcctgccagccatg
caggattgtccggtgttcaatagccactccgccaagctttccccggcttggctggaggcg
ttggagtttgcagcgcaagaggtacaagattgggccatggcattggccgagctaggtaca
gattcacccgagcccggttatgaacttatgggcgacaaagggcgcgttctggcgcaagcc
gagttggcttggcccgatcaacgcgttgccgtgctgttgcctagtgcagaaacagacgcc
aaggtatttgccgagcacggatggctaatttttatcgtggacggtggtgcgctgccctcc
gacctagagaacacattgatggagacgaaggcatga
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