Paraburkholderia acidisoli: FAZ98_04385
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Entry
FAZ98_04385 CDS
T07287
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pacs
Paraburkholderia acidisoli
Pathway
pacs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FAZ98_04385 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacs03019
]
FAZ98_04385 (pnp)
03016 Transfer RNA biogenesis [BR:
pacs03016
]
FAZ98_04385 (pnp)
Enzymes [BR:
pacs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FAZ98_04385 (pnp)
Messenger RNA biogenesis [BR:
pacs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FAZ98_04385 (pnp)
Transfer RNA biogenesis [BR:
pacs03016
]
Prokaryotic type
tRNA degradation factors
FAZ98_04385 (pnp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QGZ61036
UniProt:
A0A7Z2GFV5
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All DBs
Position
1:1020841..1022985
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AA seq
714 aa
AA seq
DB search
MTMFNKVVKEFKWGQHNVRLETGEIARQASGAVIVDVEDTVVLATVVGAKTAKPGQDFFP
LTVDYLEKTYSAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVL
SINPEIPADIPALIGASAALAISGLPFNGPVGAARVAYIDNEFVLNPTRSQSKQSRLDLV
VAGTERAVLMVESEADQLPEDVMLGAVVFGHEQMQTAIDAIHELVRDGGKPEWNWQPAPK
DEALIGRVTDIAYNELLAAYQLRDKQQRSAKLKEVYAATSAKLEAEAAAAGTTAADKATV
GNMMFDLEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQALVV
ATLGTKGDEQIIDALEGEYRDRFMLHYNMPPFATGETGRVGSPKRREVGHGRLAKRALVA
CLPSAEEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGN
KFAVLTDILGDEDHLGDMDFKVAGTEAGVTALQMDIKIQGITKEIMQVALAQANEARLHI
LGKMTSAVSGVNTELSAYAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDG
VVTIASTSSEGMAEAKKRIENITAEIEVGQVYEGAVLKLLDFGAIVNLLPGKDGLLHISE
IANERIKDINDYLKEGQVVKVKVIQTDEKGRVRLSAKALLNEQSGGAPQGEPQQ
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgttcaacaaggtcgtgaaggaattcaagtggggccagcacaacgttcgcctc
gaaacgggtgagatcgcccgtcaggccagcggcgcggtgatcgtcgacgtcgaagacacc
gtcgtgctcgccaccgtcgtcggcgcgaagacggccaagccgggtcaggacttcttcccg
ctcaccgtcgactacctcgaaaagacctattcggccggcaagatcccgggcggcttcttc
cgtcgcgaaggccgtccgtcggaaggcgaaacgctgatctcgcgcctgatcgaccgtccg
ctgcgcccgctcttcccggaaggcttctacaacgaagtccaggtcgtgatccacgtcctg
tcgatcaacccggaaatcccggctgacatccccgcgctgatcggcgcgtcggctgcgctg
gcgatctcgggtctgccgttcaacggcccggtgggcgccgcacgcgtggcctacatcgac
aacgaattcgttctgaacccgacgcgctcgcaaagcaagcagtcgcgcctcgacctcgtg
gtcgccggcacggaacgcgctgtgctgatggtggaatcggaagccgaccagctgccggaa
gacgtgatgctcggcgcggtcgtgttcggccacgaacagatgcaaaccgccatcgacgcg
atccacgaactggttcgcgacggcggcaagcccgagtggaactggcagccggcgccgaag
gacgaagccctgatcggccgcgtcaccgacatcgcctacaacgaactgctcgccgcgtat
caactgcgcgacaagcaacagcgttcggccaagctgaaggaagtctacgcggcgacctcg
gcgaagctcgaagccgaagcggcggcagccggcacgacggcagccgacaaggccaccgtc
ggcaacatgatgttcgacctcgaagcgaagatcgtccgtacgcagatcctgaacggcgag
ccgcgtatcgacggccgcgacacgcgcacggtgcgcccgatcgagatccgcacgggcgtc
ctgccgcgtacgcacggttcggcgctgttcacgcgtggcgaaacgcaggcgctggtggtg
gccacgctcggcaccaagggcgacgagcagatcatcgacgcgctcgaaggcgagtaccgc
gaccgcttcatgctccactacaacatgcctccgttcgcgaccggcgaaacgggccgcgtg
ggttcgcccaagcgccgtgaagtcggccacggccgtctcgccaagcgcgcgctcgtcgcg
tgcctgccgagcgccgaagagttcggctactcgatccgcgtcgtttcggaaatcaccgaa
tcgaacggttcgtcgtcgatggcttcggtctgcggcggctgcctcgcgctgatggacgcc
ggcgtgccgatgaaggcgcacgtcgccggtatcgcgatgggcctgatcctcgaaggtaac
aagttcgccgtgctgaccgacatcctcggcgacgaagatcacctcggcgacatggacttc
aaggtggcgggtacggaagcgggcgtgaccgcgctgcagatggacatcaagatccagggc
atcaccaaggaaatcatgcaggtcgcgctcgcgcaagcgaacgaagcccgtctgcacatc
ctcggcaagatgacctcggcggtctcgggcgtgaacacggaactgtcggcttacgcgccg
cgcatgatcaccatcaagatcaatccggaaaagatccgcgacgtgatcggcaagggcggt
tcggtgatccgcgcgctgacggaagaaaccggcacgacgatcgacatctccgacgacggc
gtcgtgaccatcgcctcgacctcgagcgaaggcatggctgaagcgaagaagcgcatcgaa
aacatcacggccgaaatcgaagtcggtcaggtgtacgaaggcgcggtcctcaagctgctc
gacttcggcgcgatcgtgaacctgctgccgggcaaggacggcctgctgcacatctccgaa
atcgccaacgagcgtatcaaggacatcaacgactacctgaaggaaggccaggtcgtgaag
gtcaaggtcatccagacggacgagaagggtcgtgtgcgtctgtccgccaaggcgctgctc
aacgagcagagcggcggcgcaccgcagggcgaaccgcagcaataa
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