Paraburkholderia acidisoli: FAZ98_04935
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Entry
FAZ98_04935 CDS
T07287
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pacs
Paraburkholderia acidisoli
Pathway
pacs03420
Nucleotide excision repair
pacs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAZ98_04935
03430 Mismatch repair
FAZ98_04935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacs03400
]
FAZ98_04935
Enzymes [BR:
pacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FAZ98_04935
DNA repair and recombination proteins [BR:
pacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAZ98_04935
MMR (mismatch excision repair)
Other MMR factors
FAZ98_04935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DUF8203
Motif
Other DBs
NCBI-ProteinID:
QGZ61130
UniProt:
A0A7Z2JFG7
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All DBs
Position
1:1135517..1137907
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AA seq
796 aa
AA seq
DB search
MPELLANLNPEQHAAVTLPNEPALILAGAGSGKTRVLITRIAWLIQQGLASPMTILAVTF
TNKAAREMMSRLQAMMPIDTRGMWIGTFHGLCNRMLRAHYRDAGLPQTFQILDTADQLSA
IKRLMKGLNIDDEKYPPKNLQYFINNAKEQGLRPKDVDVTDDFNRKFVELYEAYDQQCQR
EGVVDFAELLLRCYELLAYNAPLRAHYQARFRDILVDEFQDTNKLQYAWLKLLAGPGNAI
FAVGDDDQSIYAFRGANVGNMRDFENEFRVKHMIKLEQNYRSHGHILDAANHLIAHNSRR
LGKNLRTDAGHGEPVRVYESATDSQEAGWIVEEIRALINQGLARNEIAILYRSNAQSRTI
EHTLVNAGVPYKVYGGLRFFERQEVKHALAYLRLIDNPNDDTAFARVVNFPTRGIGARSI
EQLADAARLYNCSMAAAIPYVTGKAGSSLGSFANLVAKMRAETAQMSLPEAVEYTVRTSG
LAEFYQTEREGQDRLENLQELVNAATAFVSEAGYGLDTPARSIPLRPGASALPEIVSQDG
EIEVLDAAEITDPAQNPDFMTPLAGFLSHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFT
AVFITGLEEGLFPHENSAMEADGLEEERRLMYVAITRAKERLYISFAQSRLLHGQTRYNV
RSRFFDELPQESLKWLTPKVEAGARWGGRADNAGWGRDWFGRGGNGGNGGGGGGSGGSRD
RDAYIADKTPAPAFANAQRAAETGFRVGQGVFHTKFGEGTITALEGSGTDAKAQVRFKRH
GEKWLALAVAKLQAVE
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgctcgcgaatctgaaccccgaacaacacgccgccgtgactttgcccaac
gagccggcgctcatcctggcgggggcgggcagcggcaagacgcgcgtgctcatcacgcgc
atcgcctggctgatccagcagggtctcgcctcgcccatgacgatcctcgccgtgaccttc
acgaacaaggccgcgcgcgaaatgatgagccgtctgcaagccatgatgccgatcgacacg
cgcggcatgtggatcggcaccttccacgggctctgcaaccgcatgctacgcgcgcattac
cgcgacgcgggactgccgcagaccttccagattctcgatacggccgaccagctttcggcc
atcaagcgtctgatgaagggcctgaacatcgacgacgaaaaatatccgccgaagaacctg
cagtacttcatcaataacgcgaaggagcagggcctgcggccgaaagacgtcgacgtgacc
gacgacttcaaccgcaagttcgtcgagctgtacgaagcctacgaccagcaatgccagcgc
gaaggcgtggtcgatttcgccgagctgctgctgcgctgctacgaactgctcgcctacaac
gcgccgctgcgcgcgcactatcaggcgcgctttcgcgacatcctcgtggacgagttccag
gacaccaacaagctccagtacgcgtggctcaagctgctcgcggggccgggcaacgcgatc
ttcgcggtgggcgacgacgaccagtcgatctacgcgttccgcggcgcgaacgtgggcaac
atgcgcgacttcgagaacgagttccgcgtgaagcacatgatcaagctcgaacagaattac
cgctcgcacggccatattctcgatgcggcgaatcatctgatcgcgcacaactcgcggcgt
ctcggcaagaacctgcgcacggacgcgggccacggcgagcccgtgcgcgtgtacgaatcg
gcgacggattcgcaggaggcgggctggatcgtcgaagaaattcgcgcgctcatcaaccag
ggcctggcgcgcaacgagatcgccattctctaccgcagcaacgcgcagtcgcgcacgatc
gaacacacgctcgtgaacgcgggcgtgccgtacaaggtgtacggcggcctgcgcttcttc
gagcgccaggaggtgaagcatgcgctcgcgtatctgcgcctcatcgacaatcccaacgac
gacacggcgttcgcgcgcgtggtgaatttccccacccgcggcattggcgcgcgctcgatc
gagcaactggccgacgcggcgcggctctacaactgttcgatggccgcggccattccctac
gtcacgggcaaggccggttcgagtctcggctcgttcgcgaatctcgtcgcgaagatgcgc
gcggaaaccgcgcagatgagcctgcccgaagccgtcgaatacacggtgcgcacgagcggt
ctcgcggagttctatcagaccgagcgcgaaggccaggaccggctggaaaacttgcaggaa
ctcgtgaacgcggccacggcgttcgtgagcgaagcgggctacgggctcgacacgcccgcg
cgctcgattccgctgcggccgggcgcgagcgcgctgcccgagatcgtttcgcaggacggc
gagatcgaagtgctcgacgcggccgagatcaccgacccggcgcagaaccccgacttcatg
acgccgctcgcgggcttcctctcgcacgcgtcgctggaagccggcgacaaccaggcgcag
gcgggccaggacgccgtgcaactgatgaccgtgcacgcggcgaagggcctcgaattcacg
gcggtgttcatcaccggtctcgaggaaggcctgttcccgcacgagaacagcgcgatggaa
gccgacggtctcgaggaagagcgccgcctgatgtacgtggcgatcacgcgcgcgaaggag
cggctctatatctcgttcgcgcaaagccgcctgctgcacggccagacgcgctacaacgtg
cgctcgcgcttcttcgacgaactgccgcaggagtcgctcaagtggctcacgcccaaggtc
gaggcgggcgcgcgctggggcggccgggcggacaacgccggctggggccgcgactggttc
ggccgcggcggcaacggtggcaatggcggcggcggcggtggaagcggcggctcgcgcgac
cgcgacgcctatatcgccgacaagaccccggcgcccgccttcgcgaacgcgcagcgcgcc
gccgaaacgggcttccgcgtgggccagggcgtgttccacacgaagttcggcgagggcacg
atcacggcgctggaaggcagcggcaccgacgccaaggcgcaggtccgcttcaagcgccac
ggcgaaaagtggctcgcgctcgcggtcgccaagctgcaagccgttgaataa
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