Paraburkholderia acidisoli: FAZ98_06310
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Entry
FAZ98_06310 CDS
T07287
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacs03016
]
FAZ98_06310 (thpR)
Enzymes [BR:
pacs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FAZ98_06310 (thpR)
Transfer RNA biogenesis [BR:
pacs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FAZ98_06310 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QGZ61374
UniProt:
A0A7Z2JFD6
LinkDB
All DBs
Position
1:1457845..1458456
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AA seq
203 aa
AA seq
DB search
MATRAHAYAEVVVYPLAQLALPGFEAPPSDVVHQLFFAVMPDANTAAKIEACARHWQSEM
DVKARLLRTERFHITLNVLGADLYLPQQLIDRARAVAASLNAAPFEVTFDRLAHFGRQWV
LTSSTGLEALIDFQQKLDSLLKQSHLKTRNAHFTPHLTLLYHKRKFPTREIEPITWTVRE
FVLIDSLQGETHYEYKGRFPLNG
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcgtgctcacgcgtacgctgaggtcgttgtgtacccactcgctcaactcgca
ctaccgggattcgaagcgccgccctccgatgtcgtgcatcagttgtttttcgcggtaatg
cccgacgcgaacaccgccgcgaagatcgaagcatgcgcacgtcattggcagtccgaaatg
gacgtgaaagcccggctgctgcgcaccgagcgctttcacatcacgctgaatgtactcggc
gcagacttgtacttgccacagcagttgattgaccgcgcacgggcggtcgcggcaagtctg
aatgcagcgccgttcgaagtcacgttcgaccgcctggctcacttcggtcgacagtgggtg
ctgacctccagcaccggcctcgaagccttgatcgactttcagcaaaaactcgacagtttg
ctcaagcaatcgcatctgaaaacccgcaacgcacacttcacgccgcatctcacgctgctt
taccacaaacgcaaattccccacgcgcgagatcgaaccgatcacgtggacggttcgcgag
ttcgtgctgatcgacagcttgcagggcgaaacgcattacgagtacaaagggcgcttcccg
ttgaacgggtaa
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