Paraburkholderia acidisoli: FAZ98_11765
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Entry
FAZ98_11765 CDS
T07287
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacs03016
]
FAZ98_11765
Enzymes [BR:
pacs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FAZ98_11765
Transfer RNA biogenesis [BR:
pacs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FAZ98_11765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
QGZ62349
UniProt:
A0A7Z2JGC4
LinkDB
All DBs
Position
1:complement(2677670..2679844)
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AA seq
724 aa
AA seq
DB search
MNVFFEESGSFKAGSVLSKQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAAELMTEAEAA
SQDIDLDFLWECAPADEFAFTALASEYFGETFGPVERAALVLRLHGSPVYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQAGYEEELKAGKLPEAFAGKALGLLTKPDKNSIEYKA
LEAAAAARGISMPRLMLETGGVASPRALHEARFLAEFFPHGTGFPAVEVGALPEDLPDAA
DHVQAFSIDDVTTTEIDDAFSIEHLADGRVRIGIHIAAPALGIARGDTADTVARTRLSTV
YMPGDKITMLPDDFVDAFTLKEGGMRPALSLYSIVNRETQEIVATETRAERVFVKSNLRH
NTLDELVTEETLAAGTGEYPHKDDIAVLWPFAQALFEKRQQARAGYGLRREVQRNTDYNF
YVDGEHVSITPRRRGSPLDMIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKR
TRMQTNAAPHEGLGVAQYAWSTSPLRRYVDLVNQWQLLACVEHGVAAKLVAPFKPKDADL
FAVVQGFDETYSAYADHQRRMEYFWCLRWLQQEMRGEGGREARREFPASVVKDDLVRFEE
VPLLMHVPALGVHARGTRLMMDVLSIDELTIEASVRMLRVLDAPVVTSGEQPEEEAGDDE
ELIEAADDSAQSEAEAIAEADEGEAGGETDDETGSKAGAAETDAETDASAQAQSNEQHAT
EPRE
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttctttgaggaatcgggcagtttcaaggccggcagcgtgctgtcgaagcag
ggcgacgccttccaggtcgagttgccgggcggtcgccgcgccaaggtgcgcgcgaaggac
gtgctgatcgagttcgaaaagcccgccgcggccgaactgatgaccgaagcggaagccgcg
tcgcaggacatcgatctcgacttcctgtgggaatgcgcgcccgccgacgagttcgcgttc
accgcgctcgcgagcgagtacttcggcgaaaccttcggcccggtcgagcgcgcggcgctc
gtgctgcgtctgcacggctcgcccgtctacttccgccgcaagggccgcggccagtatcag
cgcgcgcccgaagagcagctcaagatggcgctcgcctcgctcgagcgcaagcgccagcag
gcgctggtgcaggccggttacgaggaagaactgaaggcgggcaagctgcccgaggcgttc
gcgggcaaggcgctcggcctgctcacgaagccggacaagaactcgatcgaatacaaggcg
ctcgaagccgcggccgccgcgcgcggcatttccatgccgcgcctgatgctcgaaaccggc
ggcgtcgcgtcgccgcgcgcgctgcacgaggcgcgctttctcgccgaattcttcccgcac
ggcaccggctttccggccgtggaagtgggcgcgctgcccgaagatctgcccgacgccgcc
gaccacgtgcaggcgttttccatcgacgacgtcaccacgaccgaaatcgacgacgcgttc
tcgatcgagcatctcgccgacggccgcgtgcgcatcggcattcacatcgcggcgccggcg
ctcggcatcgcccgtggcgacacggccgacaccgtggcgcgcacgcgcctgtccacggtg
tacatgcccggcgacaagatcaccatgctgcccgacgatttcgtcgacgccttcacgctg
aaggaaggcggcatgcgcccggcgctgtcgctctacagcatcgtgaaccgcgagacgcag
gagatcgtcgccaccgaaacgcgcgccgagcgcgtgttcgtgaagagcaacctgcgccac
aacacgctcgacgaactcgtgactgaagaaacgctcgccgccggcacgggcgagtatccg
cacaaggacgacatcgccgtgctgtggccgttcgcgcaggcgttgttcgaaaagcgccag
caggcgcgcgcgggttacggcctgcgccgcgaagtgcagcgcaacaccgactacaacttc
tatgtcgacggcgagcacgtcagcatcacgccgcgccgccgcgggtcgccgctcgacatg
atcgtcgcggaactcgcgattctggcgaactccacgtggggtgcgttcctgcacgaccac
ggcgtgccgggcatctaccgctcgcagcgcgcgttcggcgcgcccacgggcccgaagcgc
acgcgcatgcagaccaacgccgcgccgcacgaaggcctgggcgtcgcgcagtacgcgtgg
agcacctcgccgctgcgccgttacgtcgacctcgtgaaccagtggcagttgctcgcgtgc
gtcgagcacggcgtggccgcgaagctggtcgcgccgttcaagcccaaagacgccgatctc
ttcgccgtcgtgcagggcttcgacgaaacctattccgcgtacgccgaccatcagcgccgc
atggagtacttctggtgcctgcgctggctccagcaggaaatgcgcggcgagggcggccgc
gaggcgcgccgcgaattcccggcgagcgtggtgaaggacgacctcgtgcgcttcgaggaa
gtgccgctgctcatgcacgtgcccgcgctcggcgtgcacgcgcgcggcacgcgtctgatg
atggacgtgctgtcgatcgacgaactgacgatcgaggcttcggtgcgcatgctgcgcgtg
ctcgacgcgccggtcgtgacgagcggtgaacagcccgaagaagaggcgggcgatgacgaa
gagctgatcgaagccgccgacgactccgcgcaaagcgaagccgaagcgatcgccgaagcg
gacgagggcgaagcaggcggcgaaacggacgacgaaacgggcagcaaagcaggcgcggcg
gaaaccgacgccgaaaccgacgcgtcggcgcaagcgcagtcgaacgaacagcacgccacg
gagccacgcgaatga
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