Paraburkholderia acidisoli: FAZ98_12670
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Entry
FAZ98_12670 CDS
T07287
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pacs03016
]
FAZ98_12670 (thpR)
Enzymes [BR:
pacs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FAZ98_12670 (thpR)
Transfer RNA biogenesis [BR:
pacs03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FAZ98_12670 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QGZ62512
UniProt:
A0A7Z2JEP9
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All DBs
Position
1:complement(2868010..2868591)
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AA seq
193 aa
AA seq
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MSDARATDRDSAEPQQWHRCFIALAPDAPTRHALATLEVPPRARRVPQAQLHLTVAFIGA
MSFEQGDALARGLAIHAPHARPMPRAEVTKLDYWPKRATPRLMVAVLAMSEAFAALDRRV
RALLGEAGLPLDARAFRPHVTLARFPRDAAAVPAIGEDTALPAPLRFESLVLYSSTLAKQ
GARYEALAVVKLD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatgcgcgcgcgaccgatcgtgattccgccgagccgcagcagtggcaccgctgc
ttcatcgcgctcgcccccgatgcgcccacgcgccacgcgctggccacgctggaagtgccg
ccgcgcgcgcggcgcgtgccgcaggcgcagttgcatctcaccgtggcgttcatcggcgcg
atgtcgttcgagcagggcgacgcgctcgcgcgcgggctcgccattcatgccccgcacgcc
cggcccatgccgcgcgccgaggtcacgaaactcgattactggccgaagcgcgccacgccg
cgcctgatggtcgccgtgctggcgatgtcggaggcgttcgcggcgctcgaccggcgcgtg
cgtgccctgttgggcgaagcgggtttgccgctcgatgcgcgggcgtttcgtccgcatgtg
acgttggcgcgctttccgcgcgatgcggcggcggtgcccgccatcggcgaagacacggcc
ttgcccgcgccgctgcgcttcgaatcgctcgtgctgtattcgagcacgctcgcgaagcag
ggcgcgcgatatgaggcgcttgccgtggtgaagctggattga
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