Paraburkholderia acidisoli: FAZ98_17610
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Entry
FAZ98_17610 CDS
T07287
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pacs03032
]
FAZ98_17610
03400 DNA repair and recombination proteins [BR:
pacs03400
]
FAZ98_17610
Enzymes [BR:
pacs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FAZ98_17610
DNA replication proteins [BR:
pacs03032
]
Prokaryotic type
DNA Topoisomerases
FAZ98_17610
DNA repair and recombination proteins [BR:
pacs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FAZ98_17610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QGZ63591
UniProt:
A0A7Z2JGA1
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All DBs
Position
2:760447..761592
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AA seq
381 aa
AA seq
DB search
MDRDFDLSEEHATTAGDFVRARSTPRRPPKRAARHAAHKPASPAVHRSSDSEPGYRRQRT
PEGFDYLNVRGKLIKDARIIARILSIVIPPAWEDVWICTDPLGHLQATGRDARGRKQYRY
HPSWREQRESEKFAKIAQFARALPRVRAAVERDLALEGLPREKVIAAIVRLLDRSLARIG
GAEYARDNATYGLTTLCKRHVRLDDESAMLRFKGKHGIKHEISVDDALVLAVVRECRQLP
GRELFACVVDAESRRIDADDVNDYLQENGGCGITAKDFRTWGASVAALALLYDLDPPRSD
RAARRTLAQTIRQVALLLRNTPAVCRRSYVHPWVVEAWQTATLGNKRFRASNAPLAPAER
AFALLLKTRTACGAKRTQRIA
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgatttcgacctttcggaagagcacgccaccacggcgggggatttcgtccgc
gcgcgctccacgccgcgccgcccgccgaagcgcgcggcacgtcacgcggcacacaagccg
gcgtcgcccgctgtgcatcgcagttcggacagcgagcccggttatcgccgccagcgcacg
ccagagggcttcgactacctcaacgtgcgcggcaagctcatcaaggacgcgcgcatcatc
gcgcgcattctctccatcgtgattccgcccgcctgggaggacgtctggatctgcaccgat
ccgctcggtcacttgcaggcaacggggcgcgatgcgcgcggccgcaagcagtatcgctat
cacccttcgtggcgtgagcagcgggagagcgagaagttcgcgaagatcgcgcaattcgcg
cgggcgttgccgcgcgtgcgcgctgccgtcgaacgcgatctcgccctcgaaggcctgccg
cgcgagaaagtcattgccgcgatcgtgcgcctgctcgatcgctcgctcgcaagaatcggc
ggcgccgaatatgcgcgcgacaacgccacctacggtttgaccacattgtgcaagcgtcac
gtgcgactcgacgacgaaagcgccatgctgcgcttcaagggcaagcacggcatcaagcac
gagatttccgtcgacgatgccctcgtgctcgccgtcgtgcgcgaatgccgccagctgccc
ggccgcgagttattcgcttgcgtggtggatgccgaatcgcgcaggatcgacgccgacgac
gtgaacgactatctacaggaaaacggcggctgcggcatcacggcgaaggactttcgcacg
tggggcgcgagcgtggcggcactggcgctactctacgatctggatccgccgcgcagcgac
cgtgcggcgcgccgaacgctcgcgcaaaccattcgtcaggtcgcgttgttgctgcgcaat
accccggccgtgtgccgccgcagctatgtgcatccatgggttgtggaagcctggcaaacc
gccaccttgggcaacaagcgctttcgcgcgagcaacgcaccgctcgcgccggcagagcgt
gctttcgcgctgctgctgaaaacgcgcacggcatgcggtgcgaaacgcacacaacgcata
gcgtaa
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