Paraburkholderia acidisoli: FAZ98_27815
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Entry
FAZ98_27815 CDS
T07287
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
pacs
Paraburkholderia acidisoli
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pacs03000
]
FAZ98_27815
Transcription factors [BR:
pacs03000
]
Prokaryotic type
Helix-turn-helix
IclR family
FAZ98_27815
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
SGL
HTH_IclR
MarR_2
TrmB
HTH_24
HTH_Crp_2
HTH_20
MarR
Dimerisation
HTH_11
HTH_23
Rrf2
HTH_Cmi2_C
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QGZ65554
UniProt:
A0A7Z2GQ79
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All DBs
Position
3:1262750..1264333
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AA seq
527 aa
AA seq
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MSKSSNTGEGTASLEKAIDVLDAISAAPEGISQSELSEQVALPRTTLYRILATLNARGLV
RRDPSRHVYCLGFRCVEMARQAYAMPELVSAASHELRALRDLTGETSYVGTLEGIDVVSL
ERYDSPHTQRSRTSHGHRKPVYATSQGKAILAALPAVERDAIVAAVRLKAHTEMTITDRR
RLVAELRVVASRGYAIDDEENVLGTRCVGAAITDAHGVVRGAISVAGPAYRLTHHRLELL
GPELVAAARHIGALLTPLRRAGESTGDAVTPTSAPTALYGAHPVWSPERQALIWADTLAP
ALRISSESGGEQRVQISHPIRCLLVTAQGIRAFHEAGSTLVDADKKRPPPDTDRVLLAAC
VGAEDIIWVSSLQARKFQIGILHDDGAFTSKWSLNHAVDGLRFDRTTGLLFGTMPDTGDI
IVLNPSRKEVRTFARVPKSSGVLSGLDVDNEGGVWVALRDGWSAMRFAADGNLDQTVPLP
VPCPTGIAVGGVDGKTLFIATARQPVPLDVLKKAPLSGSLFRLALTA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagagcagcaacacaggtgagggaaccgcgtcgctcgaaaaggcgatcgatgtg
ctggatgcaatcagcgctgccccggaaggcatcagccagtcggagctttcggagcaggtt
gcgttgccgcgcacgacgctgtatcgcattctcgcgacgctaaacgcacgcgggctggtg
cgccgcgatccgtcgcggcatgtctattgcctcggattccgctgcgtggagatggcacgg
caggcgtatgcgatgcccgaactggtttccgccgcgtcgcacgagttacgggcgttgcgc
gacctgactggagaaacctcgtatgtcggcacgctggaaggcatcgacgtggtttcgctg
gagcgctacgacagcccgcacacgcagcgctcgcgcacctcgcacgggcaccggaagccc
gtgtatgcaacgagccagggcaaggcgattctggccgcgctgcctgccgtcgagcgcgac
gccatcgtggccgcggtgcggctcaaagcgcacacggaaatgacgatcaccgaccgtcgc
cgtctggtggcggagctgcgcgtggtggccagccgcggttacgccatcgacgacgaagaa
aacgtgctgggcacgcgttgcgtgggcgcggccatcacagacgcgcacggggtggtgcgg
ggcgcgatcagcgtggcgggaccggcgtatcggctcacgcatcatcggctcgaactgctt
ggcccggaactggttgcggccgccaggcatattggcgcgctgctgacgccgcttcgacgc
gcgggcgaaagcacgggcgatgcggtcacgcccacttcggcgcccactgcgctatacggt
gcgcatccggtgtggtcgcccgagcgtcaggcgctgatctgggcagataccttggcgccc
gcgctgcgcatatcgagcgagagcggaggggaacagcgcgtgcagatttcgcatcccatc
cgctgtttgctggtcacggcgcagggcatacgcgcatttcacgaagcaggcagcactctg
gtggatgccgataaaaaacgcccgccgcccgacaccgatcgcgttttgctcgcagcctgc
gtgggcgccgaggacatcatatgggtgtcgagcttgcaggcgcgtaagttccagattggc
atcttgcacgacgatggcgcgtttacgagcaaatggtccttgaatcatgccgtcgatggc
ttgcgctttgatcgcactacgggcctgttattcggcacgatgccggataccggcgacatc
atcgtgctgaatccgtcgcgaaaggaagtgcgcacctttgcgcgcgtgccgaagagttcg
ggcgtgctcagcggtctcgatgtcgataacgaaggcggcgtttgggtcgcgttgcgggac
ggctggagcgcgatgcgcttcgccgcagacggcaatctcgatcaaacggtgccgctgccg
gtgccgtgcccgaccggtatcgccgtgggcggcgtggatggcaagacgctatttatcgct
acggcgcgccagccggttccgctcgacgtgctcaagaaagcgccgctttccggcagcctg
ttcaggctagcgctcacggcgtaa
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