Paraburkholderia acidisoli: FAZ98_35135
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Entry
FAZ98_35135 CDS
T07287
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
pacs
Paraburkholderia acidisoli
Pathway
pacs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pacs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FAZ98_35135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacs03400
]
FAZ98_35135
DNA repair and recombination proteins [BR:
pacs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FAZ98_35135
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FAZ98_35135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_16
nSTAND1
DnaJ_CXXCXGXG
AAA_29
RsgA_GTPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QGZ67063
UniProt:
A0A7Z2GSD0
LinkDB
All DBs
Position
p1:155696..158341
Genome browser
AA seq
881 aa
AA seq
DB search
MPAFSPTGFVQVRGAREHNLKSVDVDVPRDALVVFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLIEQVGAPDVDAIEGLPPAVALQQQRGAPSARSSVGSVTTLSSLVRLMYSR
TGSYPPKQPMLYAEDFSPNTVQGACPACHGLGRVYDATERSMVPDDSLTIRERAIAAWPP
AWHGQNLRDILVTLGYDVDTPWRDLPKKDRDWILFTDEQPTVPVYAGFTPRETRAALKRK
AEPSYQGTFSGARRYVLHTFASTQSALMKKRVSQYMVSSDCPTCHGKRLKPEALSVTFAG
LDIGELSQLPVARLPGLLEPVSRGEWTPEPVTQAGAPLAQEARRAATARRVAAGGSAHEA
APDVRRTPNLSAGKRVAAQRLAVELLERLETLIDLGLGYLSLDRATPTLSSGELQRLRLA
TQLSSQLFGVVYVLDEPSAGLHPADGDALLEALQRLKAAGNSLFVVEHDLGVMRQADWLV
DVGPDAGEAGGRVIYSGPPHGLKQVAASHTRDYLFPDEDAPGKHAAVSRREPRGWLRLKG
VTRNNLHGLNAAFPLGCLSVVTGISGSGKSSLVSQALPDLVAERLGRVPETPDEDGVDPL
FAAAPATTDGRIVEGMEKIRRLVRVDQKPIGRTPRSNLATYCGLFDHVRELFAQTPAARK
RRYGAGRFSFNVPQGRCPTCEGEGFVMVELLFLPSVYAPCSTCRGSRYNPQTLEIRWRER
TIADVLAMTVDSACEFFEGEAQVMRSLDVLRAIGLGYLRLGQPATELSGGEAQRIKLATE
LQRAQRGDTLYILDEPTTGLHPADTDRLMAQLQGLADAGNTVILVEHDMRVAAQGDWVID
VGPGAGDAGGRIVAEGAPETVAGQAQSRTASYLRAALASRA
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgccagccttttcaccaaccggcttcgtgcaggtgcgcggcgctcgcgaacacaatctc
aaaagcgtcgatgtcgatgtcccgcgcgatgcgctcgtcgtattcaccggtgtatccggt
tccgggaaatcgtcgcttgcattcggcacgctgtacgcagaggcgcagcggcgttatttt
gagtcggtggcaccgtatgcgcggcgcttgatcgaacaggtgggcgcacctgatgtcgat
gccatcgagggcctgccacccgcggtcgccttgcagcagcagcgcggggcgccgagtgcg
cggtcgtcggtgggcagcgtgaccacgctttccagcctcgtgcgcttgatgtactcgcgc
actggctcgtatccgccgaagcagccgatgctgtatgcggaggatttttcgccgaacacg
gtgcagggtgcctgtccggcctgtcatggtcttggccgcgtgtacgatgccaccgaacgc
tcgatggtcccggacgattcgcttacgatccgtgagcgcgcgattgccgcgtggccgccc
gcgtggcacggccagaatctgcgcgacatccttgttacgctgggctacgacgtcgatacg
ccatggcgcgatttgccgaaaaaagatcgcgactggatcctcttcaccgacgaacagccg
accgtaccggtctatgccggcttcacgccgagggaaacgcgcgcggcgctcaagcgcaag
gcggagccgagctatcagggcactttctccggcgcgcgccgttatgtactgcataccttc
gcgagcacgcagagcgcgttgatgaaaaagcgcgtctcgcagtacatggtgagcagcgac
tgccccacgtgccacggcaagcgcctgaaaccggaagcgctttcggtgacgtttgccggt
ctcgatatcggcgagctttcgcaattgccggttgcgcggctcccgggcttgctcgagccg
gtctcgcgcggcgaatggacgcccgaaccggttacccaggccggcgcaccgctggcgcag
gaggcacgccgcgctgccaccgcgcgccgcgttgcggccggcggttccgcgcacgaagcc
gcgcccgacgtgcgccgcacgcccaatctctcggcgggaaagcgcgtggcggcgcagcgg
ctcgcggtcgaactgctcgaacggctcgagacgctgattgatctggggctcggctacctg
tcgctcgaccgcgcgacgccgacgctctcttcgggcgaactgcaacggctgcggcttgca
acgcagctttcgtcgcagctatttggcgtggtgtacgtgctcgatgaaccctcggcgggc
ttgcatcccgcggacggcgacgcactgctcgaagcgctacagcgtttgaaggcggcgggc
aattcgctgtttgtcgtcgaacacgacctgggtgtgatgcggcaggccgactggctcgtc
gatgtcgggccggatgcgggtgaggcgggcggacgcgtgatctacagcggtccgccgcac
ggcctgaagcaggtggcggcttcgcatacccgtgactatcttttcccggacgaagacgcg
cccggcaagcacgcggccgtatcgcgtcgcgaaccacgcggctggctgcggctgaaaggc
gtgacgcgcaacaacctgcatggactgaatgctgcgtttccgctcggctgcctgagcgtc
gtgactggcatttcgggctcgggcaaatcaagcctcgtcagccaggcactgcccgatctc
gtggcggagcggctcggccgcgtgccggaaacgcccgacgaagacggcgtcgatccgcta
ttcgccgcggcgcccgcgaccaccgatgggcgcatcgtcgaaggcatggagaagattcga
cggctggtgcgcgtcgatcaaaagccgattggccgcacgccgcgctccaatcttgccacg
tattgcggcttgttcgatcacgtgcgcgagctgttcgcacaaacgccggctgcgcgcaag
cgccgttacggcgccggccgcttttcgttcaacgtaccgcaagggcgttgtccgacctgc
gaaggcgagggcttcgtgatggtcgaattattgtttctcccgagcgtgtatgcgccgtgt
tcgacctgtcgcggcagccgctacaacccacaaacgctcgaaatccgctggcgtgagcgc
accattgccgacgtgctcgccatgaccgtggatagcgcctgcgagttctttgagggcgaa
gcgcaggtgatgcgctcgctcgatgtgcttcgcgcaatcggcctcggttatctgcggctc
gggcagccggctaccgagctctcgggcggcgaggcgcaacgcatcaagctcgccaccgaa
ctgcagcgcgcgcagcgcggcgacacgctctatatcctcgacgagccgaccacggggctg
catcccgccgacaccgaccgtttgatggcgcagttgcagggtcttgccgatgccggcaat
acggtcatcctcgtcgaacacgacatgcgcgtggcggcgcagggcgactgggtaatcgac
gtggggccgggcgcgggcgacgcgggcggcaggatcgtggccgagggcgcgcccgaaacc
gtggcaggacaggcccagagccggaccgcgagctacctgcgcgcggcactcgcttcccgg
gcttga
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