Pontibacter actiniarum: CA264_02200
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Entry
CA264_02200 CDS
T05632
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA264_02200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pact03019
]
CA264_02200
Enzymes [BR:
pact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA264_02200
Messenger RNA biogenesis [BR:
pact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA264_02200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
ARS34345
UniProt:
A0A1X9YN89
LinkDB
All DBs
Position
505805..507160
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AA seq
451 aa
AA seq
DB search
MTFENLNLIEPILKALKTEGYTTPTPIQAKSIPLILEKKDLLGCAQTGTGKTAAFSIPIL
QLLHEKQGAEKGPRKIKALILTPTRELALQIGDSMEAYGKHTGLKHTVIFGGVPQKKQTD
ALRAGVDILIATPGRLLDLMAQKYVHLQHIELFVLDEADRMLDMGFVNDVKKVLKVLPEQ
KQSLFFSATMAPEIMKLSDTILVNPAKVEVTPVSSTANTIQQSVYYVKGPDKRKLLLHLL
KDEEMESVLVFTRTKRGADRVAKDIAKAGVTAEAIHGNKAQNARVRALDNFKSRRTRVLV
ATDIAARGIDVDDLSHVVNYELPNEPETYVHRIGRTGRAGASGIALSFCGADEVPYLASI
QKLISKNVPVIDNHPYPLTAKDFAEAASTVKEQKKQGGRGGRSRWGNKPSGEGGGSAGSA
NRNRPAGGPRNGGGNRSNGNRSRSGAPKTNA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgacattcgagaatcttaatttgattgagccaatcctaaaagctcttaaaacagaagga
tataccaccccaacacccatccaagccaaatccatcccgcttatacttgagaagaaagac
ctgctaggctgtgcccagacgggtaccggtaaaacagcggctttctctattcccattctg
cagttgctgcacgagaagcagggagcggagaaagggccacgcaagataaaagcgctgatc
ctgacgccaacgcgcgagctggcgctgcagatcggagacagcatggaagcgtacggcaaa
cacacaggcctgaagcataccgttattttcggcggtgtgccgcagaagaagcagaccgat
gccctgcgcgccggtgtagacattctgatcgccactccgggccgcttgctcgacctgatg
gcgcagaagtacgtgcacctgcagcacattgagctgtttgtgctggacgaggcggaccgt
atgctggacatgggttttgtgaacgatgtgaagaaggtgctgaaagtactgccggagcaa
aagcagtcgctgttcttctccgctaccatggcgcctgaaatcatgaagctgtccgatacc
atcctggtgaaccctgccaaggtagaggtaacgccggtatcgtctacagccaacacgatc
caacagtcggtgtactatgtaaaggggccggacaagcgcaagctgttgctgcacctgctc
aaagacgaggagatggagagcgtgctggtgtttacccgcaccaagcgtggcgctgaccgc
gtagccaaagacattgccaaggctggcgtaacagccgaagccatacacggtaacaaagcg
cagaacgcccgtgtgcgcgccctggataactttaagtcgcgcagaacgcgtgtgctggtg
gcgacggacattgccgcacgaggcatcgacgtggacgacctgagccacgtggtgaactat
gagctgccaaatgagccggagacctacgtgcaccgcatcggtcgtacaggccgtgccgga
gcgagtggtattgcgctgtcgttctgcggtgccgatgaggtgccgtacctggccagcatc
caaaagctgatttccaagaatgtgccggttatcgataaccacccgtacccgcttaccgcg
aaggattttgccgaggcagctagcacggtaaaagagcagaagaagcagggtggcagaggt
ggccgtagccgctggggcaacaaaccctctggagaaggtggcggtagcgccggaagcgca
aaccgtaacaggccggccggagggccgcgtaacggaggcggtaaccgaagcaacggtaac
agaagccgaagcggcgcacccaaaacaaacgcctaa
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