Pontibacter actiniarum: CA264_05910
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Entry
CA264_05910 CDS
T05632
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA264_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pact03019
]
CA264_05910
03009 Ribosome biogenesis [BR:
pact03009
]
CA264_05910
Enzymes [BR:
pact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA264_05910
Messenger RNA biogenesis [BR:
pact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA264_05910
Ribosome biogenesis [BR:
pact03009
]
Prokaryotic type
rRNA helicases
CA264_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Pantoate_ligase
Motif
Other DBs
NCBI-ProteinID:
ARS35012
UniProt:
A0A1X9YQ77
LinkDB
All DBs
Position
complement(1375329..1377149)
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AA seq
606 aa
AA seq
DB search
MNKIRFEELPLSPEVQRAIADMGFEEASPIQTEAIPVVLSGKDIIGQAQTGTGKTAAFGI
PTIETVDPSDRSVQALILCPTRELAIQVSGEIQKLAKYKQGISVVPIYGGQSYDRQLRAL
KQGVQIVIGTPGRVMDHIQRGTLVLDNVNKIILDEADEMLDMGFREDIEFVLERIPEDRQ
TIFFSATMSKPIMEMTKRYQTDPVLVKVVHQELTVTNIDQAYFEVRNSAKQEVLSRLLDM
YNLKSAIIFCNTKRMVDDLVTGLQARGYFSDALHGDLNQNQRSAVMNKFRNGTLEILVAT
DVAARGLDVENVEAVFNYDLPQDEESYVHRIGRTGRAGKSGKAFSFVGGRSDGYKLKDIM
RYTKAKIVLQQVPSLEDVNEIRTNMFFDKVKEVLEKGHLAKHVARIERFVNETDGYTPLD
VASALLKMSMKEAKVKEKGADAEKGLSAAKEGMDRLFITIGKKDRVHPRDLIDLLAQNSS
IPEGRVGDIDLYDKFSFVEVPTEYTAEIVENIGRVEYDGRMVIVEKSQKKGSGPKEGGED
FGFGGGGDRDRDRGGRRSGGGFRGGDRDRDRDRGGFRGDRRGGGDRDRDRGGDRRSGGGG
FRKKRF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaatcagatttgaagagcttccgctttcgccggaagtacagcgagccatcgct
gacatgggtttcgaagaagcctctcccatccagacagaagcaatcccggttgttttatca
ggtaaagacatcatcggccaggcccagacgggtacaggcaaaaccgccgctttcggcatc
cctaccattgaaaccgttgacccaagcgacagaagcgtgcaggcccttattctgtgcccg
acacgcgagctggctatccaggtttccggtgagattcagaaactggccaagtataagcaa
ggcatcagcgtggttccgatttacggtggccagagctatgaccgtcagctgcgcgccctg
aagcaaggcgttcagatcgtgatcggtacgccgggccgtgtcatggaccacatccagcgc
ggtaccctggtgcttgacaacgttaataaaatcatcctggacgaagcggatgaaatgctg
gacatgggcttccgcgaggatattgagttcgtgttggagcgtatcccggaagaccgtcag
accatcttcttctcggctaccatgtccaagccgatcatggagatgaccaagcgctaccag
accgaccctgtgctggttaaggtagtgcaccaggagctaacggtaacgaacatcgaccag
gcgtactttgaggtgcgcaacagcgccaagcaggaagtgctttcgcgcctgctggacatg
tacaaccttaagtcagccattatcttctgtaacacgaagcgtatggtggatgacctggta
accggcctgcaggcccgcggctacttctctgacgccctgcacggcgacctgaaccaaaac
cagcgctctgcggtaatgaacaagttccgcaacggcaccctggagatactggtggcaaca
gacgtggcagcgcgtggccttgacgtggagaacgtagaggccgtgtttaactacgacctt
ccgcaggacgaagaatcttacgtacaccgcattggccgtacaggccgtgccggcaagtct
ggcaaggcgttctcttttgtaggaggccgctcagacgggtacaaactgaaggacatcatg
cgctataccaaagccaagattgttctgcagcaggtaccgtcgctggaagacgtaaatgag
atccgcacgaacatgttcttcgataaagtgaaggaagtgctggaaaaaggacacctggcc
aagcatgtagcgcgcatcgagcgcttcgtgaacgaaaccgacggatacacaccgcttgac
gtggcgtcagccttgcttaaaatgagcatgaaggaagccaaggtgaaagaaaagggtgca
gatgccgagaaggggcttagcgccgccaaagaaggcatggaccgcctgttcatcacaatc
ggcaagaaagaccgtgtgcatccgcgcgacctgatcgacctgctggcgcagaactccagc
attccggaagggcgtgtgggcgatatcgacctgtacgacaagttcagctttgtggaagtg
ccaacagagtacacggctgagatcgtggaaaacattggccgcgtagagtatgatggccgc
atggtgatcgtggagaaatcgcagaagaaaggctcaggccctaaagaaggcggtgaagac
ttcggcttcggcggcggtggcgacagagacagagaccgtggcggccgtagaagcggcggc
ggtttccgtggcggcgatcgtgaccgtgaccgtgaccgtggtggcttccgcggcgacaga
cgcggcggcggcgaccgtgatcgtgaccgtggcggagacagaagaagcggtggcggtggc
ttccgtaagaaaagattctaa
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