Pontibacter actiniarum: CA264_07560
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Entry
CA264_07560 CDS
T05632
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA264_07560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pact03019
]
CA264_07560
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_07560
Enzymes [BR:
pact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CA264_07560
Messenger RNA biogenesis [BR:
pact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA264_07560
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CA264_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
HTH_IclR
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ARS35305
UniProt:
A0A1X9YQZ5
LinkDB
All DBs
Position
complement(1752796..1754928)
Genome browser
AA seq
710 aa
AA seq
DB search
MATIREAREALKLYFGYEQFRPMQEQIIEGVLQGQDVVVLMPTGGGKSVCYQVPAVVQPG
MCVVVSPLIALMKDQVEALLANGIPAAYINSSQSAEQQYQIENQCLDGKLKLLYVSPEKL
LSSGFMAFLRRINISLFAVDEAHCISSWGHDFRPEYTQLKALKQQFPTTPVIALTATADK
LTQKDIQEQLYLRNPQVFVASFDRPNINLMVKPGKDRFNKITDFLMRRQKQPGIIYCLSR
KATESLADKLKRNGFNASYYHAGMSPNQRAKAQEDFLNDDTQIVCATIAFGMGIDKSNVR
WVIHYNLPKNVEGYYQEIGRAGRDGAQSDALLFYSYADVMNLRNMLQDNQNEAQTELQLV
KLERMQQFAEAAACRRRILLQYFGETMQKNCGNCDICRNPPTRFDGTVIAQKALSAIART
QERANMSLLVDVLRGARNAQVLQAGFDKVKTYGAGRDVSPLDWNRYLHQMLNEGLIEMAY
DQGYTLKLTEQSKEVLFSDRKVQLVKFEEVKQEEAAVKARPKRELIKDALFEKLRALRKS
LADEYGVPPYVIFTDTTLQEMAAERPTNKIAMLAISGVGAQKFERYGDAFITEIIDFINE
EQNKGTKMKGATHLATFELLKKGLSIEDVAQLRNLNPVTIFSHLATLYEQGYAVDVQRYV
SKAEYKVISKAIAKLGADAKLKDLFEALEEQYEYYKIRLSVSIFKKENTW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatacgggaggcgagagaagccctgaaattatactttggttatgagcagttc
cgccccatgcaggagcagatcatagagggggtgctgcaggggcaggatgtggtggtactg
atgccgacaggcgggggcaagtccgtgtgctaccaggtgccggcggtcgtgcagccgggt
atgtgcgtggtggtgtcgccgctaattgccctgatgaaagaccaggtggaggcgctgctg
gcgaacggtatcccggcggcctacatcaacagctcccagagcgccgagcagcagtaccaa
atcgagaaccagtgcctggacggaaagctgaagctgctgtacgtgtcaccggagaagctg
ctctcgtcgggtttcatggccttcctgcgccgtatcaatatttcgctttttgccgtggat
gaggcccactgtatctcctcctggggccacgacttcaggccggagtacacgcagctgaag
gcgctgaagcagcagttccccaccacgcccgttattgccttaacagccactgccgataaa
ctgacgcagaaagacattcaggagcagctctatttgcgcaacccgcaggtgtttgtcgcc
tccttcgacaggcccaacatcaacctgatggtaaagcccggcaaggacaggtttaacaag
atcacggacttcctgatgcgccggcagaagcagccgggcatcatctactgccttagccgc
aaagccaccgagtcgctggccgataagctgaagcgcaacggctttaacgcctcctactac
cacgcgggcatgtcgcctaaccaacgggcaaaggcacaggaggacttcctgaacgacgac
acgcagatcgtttgcgccactattgccttcggcatgggaatcgacaagtctaacgtgcgc
tgggtgatccactacaacctgcccaagaatgtggaagggtattaccaggagatagggcga
gccggccgcgacggagcccagtcggatgcgctgctcttttacagctatgcagacgtgatg
aacctgcgcaatatgctgcaggataaccagaacgaggcccaaacggagctgcaactggtg
aagctggagcgcatgcagcagtttgcggaggccgccgcctgccgccgccgaatcctgctg
cagtacttcggcgagacgatgcaaaagaactgcggcaactgcgacatctgccgcaacccg
cccacgcgctttgatggcaccgtgatcgcccaaaaagcgctttcagccatagcacgcacg
caggagcgcgccaacatgagcttgctggtggatgtgctgcggggcgcccggaatgcccag
gtgctgcaggcaggcttcgacaaagtgaagacctacggtgccgggcgcgacgtgagcccg
ctggactggaaccgctacctgcaccaaatgctaaacgaggggcttattgagatggcctat
gaccagggctatactttaaagctgacggagcaaagtaaggaggtgctcttctcagaccgt
aaagtgcagctggtgaagttcgaggaggtgaagcaggaagaggccgccgtaaaggcaagg
ccgaagcgcgagctgataaaagacgcgcttttcgagaagctgcgcgcgctgcgcaagagc
ctggcagacgagtacggcgtgccgccttacgtgatctttactgacaccaccctgcaggag
atggcggcggagcgacctacgaacaaaattgccatgctggccatatcgggtgttggcgcg
cagaagtttgagcgctacggcgatgcctttatcaccgagatcatcgattttataaacgag
gagcagaacaaggggactaagatgaaaggtgccacccacctggccacttttgagctgctg
aagaaaggcctaagtatagaggacgtggcgcagctgcgcaacctgaacccggtgacgata
ttctctcacctggccaccctttacgagcaaggctacgcggtggatgtacaacgctatgtg
agcaaagcagagtataaggtcatttcaaaagccatcgcaaagctaggggccgatgccaag
ctgaaggatttgttcgaggcgctggaggagcagtatgagtactacaagatccgcctctcc
gtttccatttttaagaaggagaacacctggtaa
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