Pontibacter actiniarum: CA264_11515
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Entry
CA264_11515 CDS
T05632
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pact
Pontibacter actiniarum
Pathway
pact02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CA264_11515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pact03021
]
CA264_11515
Transcription machinery [BR:
pact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CA264_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_36
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ARS36012
UniProt:
A0A1X9YT31
LinkDB
All DBs
Position
complement(2679972..2680532)
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AA seq
186 aa
AA seq
DB search
MDKSLISELKEGSEKAYDALFHKFYGRLCGFAIRFVRDQEIAEEIVAESMVVLWEKRHKF
DNMLALKSYLYNTVRNASLDYLKKSGRHTSLDMLDGMEAVVAADFYIVEEEVHATLYQAL
EALPAKCRRVFELSCIEELKYSEIADDMGISLNTVKSQRARAIQLLRDFLKAHPYAVLLL
QILLGR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcactaatcagcgaacttaaggaagggagcgaaaaggcttatgatgcactg
tttcataagttctatgggcgtttatgtggatttgcaataaggtttgttcgcgatcaagag
attgctgaagaaatagtggccgaatccatggtggtgctttgggagaagcgccataagttt
gacaacatgcttgccttgaagtcctacctttataacactgtgcgtaacgcatcgctggat
taccttaaaaagtcaggaaggcatacctctctggacatgctcgatggaatggaagccgtt
gtggcggcggatttctatattgtggaggaggaggtgcatgctacactctaccaggccttg
gaagccttacctgcgaaatgtaggcgggtgtttgaactttcctgtattgaagaactgaag
tatagtgaaatcgcagatgatatgggcattagcctgaatactgttaaatcacagcgggca
agggcaatccagttactcagggattttctgaaagcccacccttatgctgtattgctcctc
cagattctgctgggaaggtag
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