Pontibacter actiniarum: CA264_13780
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Entry
CA264_13780 CDS
T05632
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pact
Pontibacter actiniarum
Pathway
pact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA264_13780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pact03019
]
CA264_13780
Messenger RNA biogenesis [BR:
pact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CA264_13780
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
DUF4954
TraF_2
Membralin
Motif
Other DBs
NCBI-ProteinID:
ARS36418
UniProt:
A0A1X9YU79
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Position
complement(3220367..3221965)
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AA seq
532 aa
AA seq
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MPDILYILLTALVALGVGVYIGRSLLQKVYKQQEEDARQRAKNIVREAEINAESIKKDRI
LEAKEKYLKMKSEFEEETNKKKNIIIQNENKVKQREQQVQKQMEQAKRLEADLQKEKDGL
QAQLDKERNNLQAQQEQLNKRKEEVEQQHQEIVGQLEKIAGLTAAEAREQLVEALKNEAQ
SHASSHIKDIVAQAKLTATKEAKKIVIETIQRTAAEHAIENCVSVFNIESDDIKGKIIGR
EGRNIRALEAATGVEIIVDDTPEAIIISGFDPVRREIARLSLHRLVADGRIHPARIEEVV
TKTRKNIEEEIVEIGERTAIDLGIHGLHPELIKMVGRMRFRSSYGQNLLQHSREVANLCA
TMAAELGLNVKHAKRAGLLHDIGKVTPDEPELPHAIIGMELAKKYKEHPDVCNAIGAHHD
EVEMTAMVSPLVQACDAISGSRPGARREIMESYIKRLKELEEAAVSFDGVNQCYAIQAGR
ELRVMVDADNVTDEKAAQLSYDISQKIEKEMQYPGQIKITVIREMRAISYAK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatatcctttacattttactaacagctcttgtagcgctcggagtgggcgtgtac
atagggcgctccctgctgcagaaagtatacaagcagcaggaggaagacgcgcgtcagcgc
gccaagaacattgttcgcgaggcagagatcaacgccgagagcatcaaaaaagaccgtatt
ctggaggcgaaggagaaatacctgaaaatgaagtctgagttcgaggaggagacgaacaag
aagaagaacatcatcatccagaacgagaacaaggtaaagcagcgcgagcagcaggtacag
aagcaaatggagcaggccaagcgcctggaggccgatctgcagaaagagaaagacggtttg
caggcgcagctggataaagagcgaaacaacctgcaggcgcagcaggagcagcttaacaag
cgcaaagaggaggtagagcagcagcaccaggagatcgttggccagctggagaagattgcc
ggcctgacagccgccgaggcccgcgagcagctggtggaggccctgaagaatgaggcccag
tcgcacgcttcgtcgcacatcaaagatattgtggcgcaggcaaagcttaccgctaccaaa
gaagccaagaaaatcgttatcgaaaccatccagcggactgccgccgagcacgccattgag
aactgcgtgtcggtgttcaacatcgagagcgacgacatcaaaggcaagatcattggccgc
gaagggcgtaacatacgtgccttagaggctgccacgggtgtggagatcatcgtagacgac
acgccggaagcgatcattatctctggctttgacccggttcgccgcgaaatcgcacgcctg
tcgctgcaccgcctggtggccgacggccgtattcaccctgcccgcattgaggaggtggtg
accaagacccgcaagaacattgaggaagagattgtagagatcggtgagcgcaccgccatt
gacctgggcatccacgggctgcacccggaactgatcaagatggtgggccgcatgcgattc
cgctcttcttatggccaaaacctgctgcagcactcgcgtgaggtagccaacctttgcgcc
accatggccgccgagcttggcctgaacgtgaagcacgccaagcgcgccggtctgttgcac
gatatcggtaaggtaaccccggacgagccggagctgccgcacgcgatcatcggtatggag
ctggccaagaagtataaagagcacccggatgtgtgtaacgccatcggtgcccaccacgac
gaggtggagatgaccgcaatggtgtctccgctggtacaggcctgcgacgccatctccggt
tcaagaccgggtgcccgccgcgagatcatggagtcgtacatcaagcgcctgaaggagctg
gaagaagccgctgtttctttcgacggtgtaaaccagtgctacgccatccaggctggccgc
gagctgcgcgtaatggtagacgccgacaatgtaacagatgagaaagccgcacagctgtcc
tacgacatctcgcagaagatagagaaggagatgcagtacccgggccagatcaagattaca
gttatccgcgagatgcgcgccatcagctacgccaaataa
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