Pontibacter actiniarum: CA264_14745
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Entry
CA264_14745 CDS
T05632
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA264_14745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pact03019
]
CA264_14745
Enzymes [BR:
pact01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA264_14745
Messenger RNA biogenesis [BR:
pact03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA264_14745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_12
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ARS36577
UniProt:
A0A1X9YUL1
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All DBs
Position
3463731..3465092
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AA seq
453 aa
AA seq
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MAEEAEKEITTFEDFKLNKQLLNAIADAGYEKPTPIQLQAIPLIMAGHDILGIAQTGTGK
TAAFLLPLLMKVKYAQGQHPRALIIAPTRELVMQIEENITLLAKYTDLRHTAIYGGLGPK
TQIEILNKGIDILVATPKRLMELYFKGELVLKDLKTLILDEADKMMDMGFMPQIRQLLEV
IPRKRQNLLFSATMPNKVVELSEEFLEFPTRVEITPQATPVETVSQTLYKVPNLRTKIEL
LEHLIQDEETFKRVIIFTRSKKNAESVSKFLEHRDYGDVRAIHGNKGQNTRINSMEAFKG
GEVRFLVATDVAARGIDVTMVSHVINFDVPLIYEDYVHRIGRTGRAENEGAAITFATDAE
LYHVQKIEKIIRMQIPQVPMPASVKLFKTPFEEQQEMAREVDRQKRRENPDFKGAFHEKQ
GKHKSNFAKGKKSKGDPKDSYWQKTKKKGSRKK
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaagcagagaaagagataaccaccttcgaggattttaagctgaacaagcag
ctgctgaacgctatagccgatgccgggtacgaaaagccgactcccatccagttgcaggcc
atcccgctgatcatggcggggcacgacatcctgggtatcgcccagaccggcacaggcaaa
acggccgctttcctgctgccgctgctcatgaaagtgaaatatgcccagggccagcacccg
cgcgcgctcattattgcccctacccgcgagctggtaatgcagattgaggagaacatcacg
ctgctggccaaatacaccgacctgcgccacacggccatctacggcggcctgggccccaaa
acacagatcgagattctgaataaaggcatcgacatactggtggccacgcccaagcgcctg
atggagctgtactttaaaggagagcttgtgctcaaagacctgaagacgctgatcctggac
gaggccgacaagatgatggacatgggcttcatgccgcagatccgccagctgctggaggtg
attccgcgcaagcgccagaacctgcttttctcggccaccatgccgaacaaggtggtggag
ctgtcagaggagttcctggagttcccgacgcgcgtggagatcacaccgcaggccacaccg
gttgaaaccgtaagccagaccctgtacaaggtgcctaacctgcgcaccaaaatagagctg
ctggagcacctgatccaggatgaggagacctttaagcgcgtgatcatctttacgcgcagc
aagaagaacgccgagagcgtttccaagttcctggagcaccgcgactacggcgacgtgcgc
gccatccacggcaacaaagggcagaacacgcgcattaactcgatggaggctttcaagggc
ggcgaagtgcgcttcctggtcgcgacggatgtggccgcaaggggtatagacgttaccatg
gtgagccacgtgattaactttgatgtgccgctgatttacgaagattatgtgcaccggatt
ggccgcacgggccgcgccgagaacgaaggtgccgcaatcaccttcgccactgacgctgag
ctgtaccacgtgcagaagatcgagaagatcatccgcatgcagataccgcaggtgccgatg
ccagccagtgtaaagttgtttaaaacaccttttgaggagcagcaggagatggcccgcgag
gtagaccgccagaagcgccgcgagaacccggactttaaaggggccttccatgaaaagcaa
ggcaagcacaagtctaacttcgccaagggcaagaaaagcaagggcgacccgaaagactct
tactggcagaagacgaagaagaaaggcagccgcaagaaataa
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