Pontibacter actiniarum: CA264_17545
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Entry
CA264_17545 CDS
T05632
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pact
Pontibacter actiniarum
Pathway
pact03410
Base excision repair
pact03430
Mismatch repair
pact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CA264_17545
03430 Mismatch repair
CA264_17545
03440 Homologous recombination
CA264_17545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_17545
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CA264_17545
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CA264_17545
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CA264_17545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
ARS37091
UniProt:
A0A1X9YWB5
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All DBs
Position
4088497..4090203
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AA seq
568 aa
AA seq
DB search
MEKRWVISQEAPVEVVQQLAEQLKISSTLASILCQRGICTFDEAKHFFRPSLQDLHDPFL
MKDMDQAVNRLNNALHSNEKILVYGDYDVDGTTSVALMYGFLRNYTSNIDFYIPDRYKEG
YGVSSQGIDWAAENGFTLIISLDCGIKSADKVAYASEKGIDFIICDHHLPDEDIPQAVAV
LDPKRVDCPYPYKELSGCGVGFKLLQAFCIQNNIEQEEAYKLLDLLVVSIAADIVPITGE
NRILAYFGLQHLNGPQPMRPGLDALKELADIRSEMDITSIVFGFAPRINAAGRMGDAKNS
VRMLLAQTKEEAFKMADIINESNKERRSKDTNITKEALQMIEQDEFLRTANSTVLFKETW
HKGVIGIVASRCIEHYYRPTIILTQSNGKASGSARSVHGFNVHSAIESCSDLLEQFGGHM
YAAGLTLPVENVPAFIERFERVVTDTITEEQKIPQIEIDAPINLKQITRNFYNIIRQMEP
FGPGNMRPVFVSECVYDTGSVRVVGDSHLKLRLTQDGFTSIDAIGFGLGDYYKAISKGIP
FDVCYTVEENIYRGVITLQLRIKDIRIK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaggtgggtaattagccaggaggcaccggtggaggtggtgcagcagcttgca
gagcagctgaaaattagttctacactggcctctatcctttgccagcgcggcatctgcact
ttcgacgaagccaagcactttttccgcccctccctgcaggacctgcacgaccccttcctg
atgaaggacatggaccaggccgtaaaccgcctgaacaacgcgctgcacagcaacgagaag
attctggtttatggcgattacgatgtggacggcaccacctccgtcgcgttgatgtacggc
ttcctgcgcaactatacttccaacattgacttctacatcccggacaggtacaaagaaggc
tatggcgtgtcgagccagggcatagactgggctgcagaaaacgggttcacgttgattata
agccttgactgcggcataaagtctgccgataaggtggcctacgcctcggagaagggcatc
gatttcattatctgcgaccaccacctgccggacgaggatatcccacaggcagtggcggtg
ctggaccccaagcgcgttgactgcccttacccgtacaaagagctctcgggctgtggggtg
ggtttcaaactgctgcaggctttctgtatacagaataacattgagcaggaagaggcctac
aagctgctggacctgctcgtggtaagcatcgcggccgatattgtgcccatcaccggcgag
aaccgcatcctggcctatttcggactgcagcacctaaacgggccgcagccgatgcgccca
ggcctagatgccctaaaggagctggccgacatccgcagcgaaatggatatcaccagcatt
gtgttcggctttgcgccacgtatcaatgccgctggccgtatgggggatgccaagaactct
gtgcgcatgctgctggcccagacgaaggaggaggcctttaaaatggccgatatcattaac
gagtctaacaaagagcgccgcagcaaggacaccaacatcaccaaagaggccctgcagatg
attgagcaggacgagtttctgcgtactgccaactccacggtgctgttcaaggaaacctgg
cacaagggcgtgattggtattgtggcgtcgcgctgcatcgagcactactaccggcccacg
attatcctgacgcagtctaacggcaaggcatccggctcggccaggtcggtgcacggcttt
aacgtgcacagcgccatagagagctgctcagacctgctggagcagtttggggggcatatg
tatgccgcaggccttacgctgcctgtagagaacgtgccggcctttatagagcgctttgag
cgggtggtgacggataccattacagaggagcagaagattccccagatcgagattgacgct
cccatcaacctaaagcagattacgcgcaacttttacaacatcattcggcagatggagccg
tttggccccggtaacatgcgcccggtgtttgtgtcggagtgcgtgtacgacaccggcagc
gtacgtgtggtcggtgattcgcacctgaagctgcgcctgacccaggacggctttaccagc
atcgacgccattggctttggccttggcgattactacaaggcaatatccaagggtattccg
tttgatgtgtgctatacggtggaggagaacatctaccggggagtaattacgctgcagctg
cgcatcaaagacatccgcattaaataa
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