KEGG   Pontibacter actiniarum: CA264_18930
Entry
CA264_18930       CDS       T05632                                 
Name
(GenBank) RNA helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pact  Pontibacter actiniarum
Pathway
pact03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pact00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CA264_18930
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pact03019]
    CA264_18930
Enzymes [BR:pact01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     CA264_18930
Messenger RNA biogenesis [BR:pact03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CA264_18930
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Utp25_C ERCC3_RAD25_C CPPA
Other DBs
NCBI-ProteinID: ARS37326
UniProt: A0A1X9YWL0
LinkDB
Position
4395640..4396905
AA seq 421 aa
MRFEDYRISDEIKKSLSKLGFKKPTDIQFKAIPPIMKGEDVLAIAQTGTGKTAAFAIPVL
DRLQFSKNRKRGDGIKCVVMVPTRELALQITEVFNEIGRGTRVTTFCVYGGVEQGPQIAK
LEDGIDVLVATPGRLFDLVSQGHIHLHRVEVLVLDEADHMLDLGFIHDIRQLITKLPRQR
QTLFFSATINEKIKELAYSLVNKPVRIQISPKDPVAKSIDHSVMYVDMDDKRFFLERVVQ
ENSDKKILAFVRTKVRAERVVAAMERVGIQAISIHGGKEQKDRLDVMRKFKKGEVKLLVA
TDVSARGIDIPNVEYVVNYDLPEQPENYVHRVGRTGRGTEKGIAVSFCAPEEKPILDEIQ
KYLTKDIKVLEVDKEDYEATIDFSAEAKYDWKALIKEAEQTDEKVKAAKSKKAKAKAKKK
K
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagatttgaagattaccgtatctccgacgagataaagaaaagcctgagcaagctgggc
tttaaaaagccgaccgatatccagttcaaagctatcccaccgatcatgaagggcgaggat
gtgctggccattgcccagacgggtacaggtaaaacagccgcctttgctattccggtgctc
gacaggctgcagtttagcaaaaaccgcaagcgcggcgacggcattaagtgcgtggtgatg
gtgccgacccgcgaactggcgctgcagataaccgaggtgtttaacgaaatcggccgcggc
acccgcgttacaaccttttgcgtgtacggcggggtggagcaggggccgcagatcgcgaag
ctggaagacggtattgacgtgctggtggccacgccgggccgcctgttcgacctggtgagc
caggggcatatacacctgcaccgcgtggaagtgctggtgctggacgaggccgaccacatg
ctggacctgggctttatccacgacatccggcagctgatcacaaaactgccgcgccagcgc
cagacgctgttcttctcggccaccatcaacgaaaagataaaggagctggcctactcgctg
gtgaacaagccggtccgcatccagatctccccgaaagacccggtggcgaaaagcatagac
cactccgtgatgtacgtggacatggacgacaagcgcttctttctggagcgcgtggtgcag
gagaactcggacaagaagatactggcctttgtgcgtaccaaagtgcgcgctgagcgtgtg
gtggcggccatggagcgtgtgggcattcaggccataagcatacatggcggcaaagagcag
aaagaccgcctggatgtaatgcgcaagtttaagaagggcgaagtgaagctgctggttgcc
accgacgtgagcgctcgcggcatcgatatcccgaacgtggagtacgtggtgaactacgac
ctgccggagcagccggagaactacgtgcaccgggtgggccgtaccggccgtggcaccgaa
aagggcatcgccgtgagtttctgcgcccctgaggaaaagccaatcctggacgagattcag
aagtacctgaccaaggacattaaggtgctggaagtggacaaggaggattacgaagccacg
atcgatttcagtgccgaggccaagtatgactggaaagcgctgataaaagaggcggagcag
acagatgagaaggtgaaggccgccaaatctaaaaaagcgaaagccaaggcaaagaaaaag
aagtag

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