Pontibacter actiniarum: CA264_19310
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Entry
CA264_19310 CDS
T05632
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA264_19310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pact03021
]
CA264_19310
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_19310
Enzymes [BR:
pact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA264_19310
Transcription machinery [BR:
pact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA264_19310
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA264_19310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-ProteinID:
ARS37394
UniProt:
A0A1X9YXB9
LinkDB
All DBs
Position
4476293..4480165
Genome browser
AA seq
1290 aa
AA seq
DB search
MAKNKTTDRINFASIKPVIDYPDFLDVQVQSFQDFFQLETPAENRAQEGLFKVFAENFPI
SDSRENFVLEFIDYHIDPPKYSVDESIDRGLTYSVPLKAKLRLICNDEDNEDFETIEQEV
FLGNIPYMTEKGSFVINGAERVIVSQLHRSPGVFFAQSKHTNGTKLYSARIIPFKGSWVE
FATDVNNVMYAYIDRKKKFPVTTLLRAIGYGTDKDILDLFGLSEEIPADKNTLKNSVGRR
LAARVLRTWTEDFVDEDTGEVVSIDRNEVILERDSEITPEDIDIILDSGVQSIILHRENV
NIADYAIIYNTLQKDNSNSEQEAVEQIYRQLRNTEAPDVETARDIIQKLFFSDKRYDLGE
VGRYRINKKLGLDTNWEAKVLTNEDIVLIVKYLIGLINSKAVVDDIDHLSNRRVRTVGEQ
LYAQFGVGLARMARTIKERMNVRDNEDFKPVDLINARTLSSVINSFFGTNQLSQFMDQTN
PLAEVTHKRRVSALGPGGLSRERAGFEVRDVHYTHYGRLCTIETPEGPNIGLISSLCVHA
RVNHMGFIETPYRKVIEGKVVVDGSVEYLTAEEEDTHHIAQANAIIDEDGNFINPTVKGR
FEGDFPVEAPNTYTYMDVAPNQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPLLKPQA
PIVGTGLEGRAAIDSRALVIAEGEGVIDFVDANKIVVKYDLTHEEKLVSFDAEYVTYNLI
KFRRTNQDTCINLTPLVKKGERVTKGQPLCEGYATNNGELALGRNLQVAFMPWQGYNFED
AIVISEKVVRDDVFTSIHIEEFELEVRETKRGEEELTSEIPNVSEEAVRNLDENGIIRIG
AEVREGDILIGKITPKGETDPTPEEKLLRAIFGDKAGDVKDASLKAPPSLNGVVIDTKLF
SRPKKDKNLRAKSKKEVEELKVKYSKELTAIKNVMVDKLVELLEGKTSQGIRHKFGDEIL
TKGSKFSRKNIIDALFPEKNPYKDESNYAVPEEVNMFKDLILENWTTDDSTNSMLVELVK
NYNKRRNIVSAHFKRERFTLEVGDELPAGIVQLAKVYIAKKRKLKVGDKMAGRHGNKGVV
ARIVREEDMPFLEDGTPMDIVLNPLGVPSRMNIGQIYETVLGWAGLRLGRTYATPIFDGA
TEEQVSAELAEAGLPHFGRSYLFDGLSGDRFDQPVTVGVIYMLKLGHLVDDKMHARSIGP
YSLITQQPLGGKAQFGGQRFGEMEVWALEAFGASNVLQEILTVKSDDVIGRAKAYESIVK
GDVLPKPNIPESFNVLIHELRGLALEITLE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
ttggctaagaataaaacgacagatagaatcaatttcgcctctatcaagcctgttattgac
taccctgacttcctagatgttcaggttcagtcgtttcaggacttctttcagttggaaaca
ccggctgaaaatagagcgcaggaaggcttgtttaaggtgtttgccgagaactttcctatc
tccgattcacgcgaaaacttcgtactggagtttatcgactatcatatagatcctccaaaa
tactctgtagatgaaagcatcgacaggggccttacctattctgttccattaaaagcaaag
cttcgcctgatctgtaacgacgaggataacgaggactttgaaacgatagagcaggaggtg
ttcttaggcaacatcccgtacatgaccgaaaaaggctcctttgtgatcaatggggctgaa
cgtgttattgtatcgcagttgcaccgttcaccaggcgtgttctttgcccagagcaagcac
acgaatggtacaaagctttactctgccagaattattccttttaaagggtcctgggttgag
tttgccactgacgtgaacaacgttatgtacgcttacatcgaccgtaagaagaagttccct
gttactacgttgcttcgtgccattggatatggtacggataaagatatcctggatctgttc
gggctttcagaagaaatccctgcagacaaaaacacactgaagaactcagttggccgcagg
ctggctgcccgtgttctgagaacatggacggaggacttcgtggatgaggatactggcgag
gtagtttccatcgaccgtaacgaagttatcttagagcgtgactcagagataactccagaa
gatatagacattatccttgactctggcgtgcagtccattatcctgcaccgcgagaacgtg
aacatcgctgactacgcgatcatctacaacacgcttcagaaagacaactctaactcagag
caggaagccgtggagcagatctatcgccagctgcgtaacacagaggcgccagacgttgaa
acagcccgcgatattatccagaagctgttcttctctgacaagcgttatgacctgggcgaa
gttggacgctacagaatcaacaaaaagcttggcctggataccaactgggaggcgaaagtg
ctgaccaacgaggacatcgttctgatcgtgaagtacctgatcggtctgatcaactcgaag
gctgtagtggatgatattgaccacttgagcaaccgccgtgtaagaacggtgggagagcag
ctgtatgcccagttcggtgttggtctggcccgtatggcccgtaccatcaaagagcgtatg
aacgtgcgcgacaacgaagacttcaaaccggttgacctgatcaacgcccgtacgctgtct
tctgtgatcaactcgttcttcggaacaaaccagctttctcagttcatggaccagaccaac
ccgctggcagaggtgacgcacaagcgtcgtgtatctgcactggggccaggcggtctgtct
agagagcgtgccggtttcgaagtacgtgacgttcattacacacactacggccgtctgtgt
accattgagacaccggaaggcccgaacatcggtctgatttcttccctgtgcgtgcacgcc
cgcgtgaaccacatgggctttatcgagacgccttacagaaaggtgatcgaaggtaaagtg
gttgtagacggttctgtcgagtacctcacagccgaagaagaagatacccaccacatcgca
caggccaacgccatcattgatgaggacggtaactttatcaacccaactgtaaaaggtcgt
ttcgaaggtgacttccctgtggaagctccgaacacctatacatatatggacgttgccccg
aaccagattgtatcggttgcggcttctctgattccgttcctggagcatgatgacgccaac
cgtgccctgatgggatcgaacatgcaacgtcaggcagtgccacttctgaagcctcaggct
ccgatcgtaggtacaggcctggaaggaagagcagcgatagactcaagagcgcttgtgatc
gccgaaggcgaaggtgtgattgactttgtagatgctaacaagatcgttgtgaagtacgac
ctgacgcacgaggagaaacttgtttccttcgacgctgagtacgtgacttacaacctgatc
aagttcagaagaacaaaccaggatacgtgcatcaacctgacgccgcttgttaagaaaggc
gagcgcgtaacaaagggacagccgctgtgcgaaggctacgccacgaacaatggtgagctt
gccctgggccgtaacctgcaggtggcgttcatgccatggcaagggtacaactttgaggat
gctattgtaatctcagagaaagttgttcgcgacgacgtgtttacctctatccacatcgaa
gaattcgagctggaagtgcgtgagacgaaacgtggcgaggaagagcttacttctgagatc
ccgaacgtgagtgaggaagccgtacgcaacctggatgagaacggtatcatccgtatcggt
gctgaggtgcgtgagggagacatcctgatcggtaagatcacgccgaaaggtgagacggac
ccaacgccggaggagaaactgctgagagccatcttcggtgataaagccggcgatgtgaag
gatgcctcgcttaaagcgccgccatcactgaacggtgtggtaatagacacaaaacttttc
tctcgtcctaagaaagacaaaaaccttcgggccaagtctaagaaagaggtagaagagctg
aaggtaaaatactcgaaggagctgacagccatcaagaatgtgatggtggacaagctggtg
gaactgctggaaggcaaaacgtctcaaggcatccgtcacaagttcggcgatgaaatcctg
acgaaagggtctaagttcagcagaaagaacatcatcgatgcgctgttccctgagaagaac
ccttacaaggacgaaagcaactacgcggtgccggaagaggtgaacatgttcaaagatctt
attctggagaactggaccaccgacgacagcacaaacagcatgctggtggagcttgtgaag
aactataacaagcgccgcaacatcgtatccgcgcacttcaagcgtgagcgtttcacactg
gaggtaggtgatgagttaccagcaggtatcgtgcagctggcgaaagtatacatcgctaag
aagcgtaagctgaaagtgggtgataagatggccggccgccacggtaacaagggggttgta
gcccgtatcgtacgcgaagaagacatgccgttcctggaagacggaacaccgatggatatc
gtactgaacccacttggtgtaccttcaaggatgaacatcggtcagatctacgaaactgta
cttggatgggccgggttaagattgggtagaacatacgctacgccaatatttgacggtgcc
acagaagagcaggtttctgctgagctggctgaggccggactgccgcacttcggccgttcg
tacctgttcgatggcctgagtggtgatcgctttgaccaaccggtaacagtaggtgtgatt
tacatgctgaaactgggccacttggttgacgataagatgcacgcccgttctatcggtcca
tactcattgatcacgcagcagccactgggcggtaaagcgcagtttggtggtcagcgtttc
ggtgaaatggaggtgtgggcgttggaggccttcggagcttcaaacgtgctgcaagaaata
cttacagttaaatctgacgacgtgatcggtcgtgcgaaagcctacgagtcaatcgtgaaa
ggcgacgtgctgccgaagccaaacatcccggaatcattcaacgtgttgattcacgagttg
agaggattggctctggagattacgttagagtaa
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