Pontibacter actiniarum: CA264_19315
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Entry
CA264_19315 CDS
T05632
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA264_19315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pact03021
]
CA264_19315
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_19315
Enzymes [BR:
pact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA264_19315
Transcription machinery [BR:
pact03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA264_19315
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA264_19315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
ARS37395
UniProt:
A0A1X9YWV8
LinkDB
All DBs
Position
4480268..4484584
Genome browser
AA seq
1438 aa
AA seq
DB search
MAFAKNKKLTQDFSKVTISLASPESILERSNGEVVKPETINYRTYKPEMGGLFCERIFGP
VKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFKSLPNKI
GYLLGLPTKKLDQIIYYERYVVIQPGILAEDGVNTLDFLTEDEYLDMVDKLPRENQMLDN
NDPNKFIAKMGAEALQMLLERINLDDLSYELRHAAAHETSQQRKAEALKRLRVVEAFRDA
TTRIENRPEWMVIRMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIK
APEVILRNEKRMLQEAVDSLFDNSRKVNAVRAEGNRALKSLSDMLKGKQGRFRQNLLGKR
VDYSGRSVIVVGPELKLHECGLPKNMAAELFKPFIIRKLIERGIVKTVKSAKKIVDRKDP
VVWDILENVLKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLVCTAFNADFDGDQM
AVHVPLGPAAVLEASMLMLASHNILNPANGAPIAVPSQDMVLGLYYVSKGKRSTENEKIE
GEGMSFYSAEEVVIATNEKRISKHAYIKVRTKVKNEQGELETKLIETVAGRVIFNQFVPE
EVGYIDELLTKKKLQQIISRVFKETGMARTAQFLDDIKTLGFQSAYKGGLSMGLGDINIP
AEKEVLVEQAKKDVDAVWQNYSMGLITDNERYNQVIDIWTRINNQITETLMRRLENEDQG
FNSIFMMMHSGARGSREQIRQLGGMRGLMAKPQKSLQGSVGEIIENPILSNFKEGLDVIE
YFISTHGARKGLADTALKTADAGYLTRRLVDVSQDVIVNEEDCGTLRGLEVSALKDNEDI
VESLSERILGRVAVHDVFDPISNDLIVASGTEITEEIARAIENTSIESVEIRSVLTCESK
RGICGKCYGRNLATGFMVQKGEAVGVIAAQSIGEPGTQLTLRTFHVGGTASNIAVEATIL
AKFGGKIEFEDVRSLDTVNNEGEPVKVVMGRSGEVKVVDPNTGKLLISNHVPYGSFLHVN
EGQVVEKGAILCNWDPYNAVILSEFDGEISYESIIEGVTYREESDEQTGYREKVIIDTKD
KTQNPAIVVNPKNGEPKGYNIPVGAHLTVENGEKIKAGQILVKIPRAIGKTRDITGGLPR
VTELFEARNPSNPAVVSEIDGVVTYGSVKRGNREIFIESKDGVKKKYMVPLSKHILVQDN
DFIRAGMPLSDGAITPTDILNIQGPGAVQEYLVNEIQEVYRLQGVKINDKHIEVVVRQMM
QKVVVVDAGDTSFLENQTVDKISFMEENDHIIDMKVVEDAGDSTNLKPGQIVTPRRLRDE
NSSLKRRDLRLVTVRDAQPAVSRPTLQGITQASLGTQSFISAASFQETTKVLSEAAIKGK
ADELLGLKENVIVGHLIPAGTGLREYQNLIVGSQEEYDALVESKKTTARTKQQELQNK
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgcgaaaaataaaaagctaactcaggacttctctaaagttacgatcagcttg
gcttcgccggagtcaatcctggagcgttccaacggagaggtagtaaagcctgagaccata
aactatagaacctataagcctgagatgggtggtctgttctgcgaaagaatattcggaccc
gtaaaggactgggaatgccactgcggaaagtataaaagaatcagatacaaaggcatcatc
tgcgaccgttgcggtgtagaggtgacggagaaaaaagtgcgtcgtgagcgtatgggccat
attgagctcgtagttccggttgcgcacatctggtacttcaaatctcttccaaacaaaata
ggttatctgctgggcttgccaacaaagaagctcgaccagattatctattatgaaagatat
gtagttattcaaccaggtatcctggcggaagacggcgtaaacacgctggacttcctgaca
gaagacgagtacctggacatggtggataaactgccacgcgagaaccaaatgttggataac
aatgatccaaacaagttcatcgcgaaaatgggtgccgaggccctgcaaatgctgctggag
cgcatcaacctggatgatctgtcttacgagctgcgccacgcagccgcacacgaaacatcg
cagcagcgtaaagctgaggccttgaagcgtctgcgcgtagtggaagccttccgtgatgcc
accacacgtatcgaaaacagaccggagtggatggttatccgcatggtgcctgttatcccg
ccggagcttcgcccactcgttccgttggacggtggccgtttcgctacctctgacttgaac
gacctgtacagacgtgtgattatccgtaacaaccgtctgaagcgtctgatcgagatcaaa
gcccctgaggtgatcctccgtaacgagaagcgaatgctgcaggaagcggtagactccctg
ttcgacaactcacgtaaagtgaacgctgttcgtgcagaaggtaaccgggcgctgaagtcg
ctttctgacatgctgaaaggtaagcaaggacgtttccgtcagaacttgcttggtaagcgt
gtggactactctggccgttcggtaatcgtggttggtcctgaactgaagctgcacgagtgc
ggtctgcctaagaacatggcagctgagctcttcaagccgttcatcatccgcaagctgatc
gaaagaggcatcgtaaagacggtaaagtcagcgaagaaaatagttgaccgtaaggaccct
gttgtgtgggacatcctggagaacgtgctgaaaggccacccagtgctcctcaaccgtgct
cctacactccacagattaggtattcaggccttccagccgaaactgatcgaaggtaaggcg
atccagttgcacccactggtgtgtacggcattcaacgccgactttgacggtgaccagatg
gcggtgcacgttccactaggacctgctgccgtactggaagcctctatgctgatgctggcg
tcgcacaacatcctgaaccctgcaaacggtgctccaattgcggtaccttctcaggacatg
gtacttggtttatactatgtatcaaaaggaaagcgcagcacagagaacgaaaagatcgaa
ggcgaaggaatgagcttctactctgcggaggaagtggtgattgccaccaacgagaagcga
atctctaagcacgcctacatcaaggtaagaacaaaggttaagaacgagcaaggcgaactc
gagacaaagctgatcgagacagttgccggccgtgtaatcttcaaccagtttgtaccggaa
gaggtaggatatatcgatgaactgctgactaagaaaaagctgcagcagatcatttcaaga
gtatttaaggaaacgggcatggcacgtacagcccagttcctggacgatatcaaaacacta
ggattccagtctgcctacaaaggaggtctgtcaatgggtcttggtgatatcaacatcccg
gctgagaaggaagtgttggtagagcaggctaaaaaggatgtagatgctgtatggcaaaac
tactctatgggtctgatcacggacaacgaacgctacaaccaggttattgacatctggaca
cgtatcaacaaccagattacggaaacgttgatgcgccgcctggagaacgaagaccaaggc
tttaactccatcttcatgatgatgcactccggagcccgtggttcaagagagcagatccgt
cagttgggtggtatgagaggtctgatggccaagcctcagaagtccctgcaaggttccgtt
ggtgagattatcgagaacccgatcctttctaactttaaggaaggtctggatgtaatcgag
tactttatctctacacacggtgcccgtaagggtcttgcggatacggcccttaaaacggcc
gatgccggttacctgacgcgtcgtctggtagacgtatcgcaggacgtgatcgtgaacgag
gaagactgtggtacgctgcgtggtctggaagtgagcgcactgaaagacaacgaagatatt
gtagagtctctgtctgagcgtatcctgggccgagtggcagtgcatgatgtgtttgaccca
atctcaaacgatctcatcgtggcgtcaggtacggagatcacagaagagatcgcccgtgct
attgaaaacacgtcgatcgagtctgttgagatccgctccgtgctgacttgtgagtctaag
cgcggtatatgcggcaagtgctacggccgtaacctggcgacaggcttcatggtgcagaag
ggcgaggctgtaggtgtaattgccgcacagtctatcggtgagccgggtacacagctgaca
ctccgcacattccacgtaggtggtacggcttctaacattgcggtagaggcaaccatcctg
gcgaagtttggcggtaagatcgagttcgaagacgttcgctcactggatacagtgaacaac
gaaggagagccggttaaagtggtgatgggccgttcaggtgaagtgaaagtagtagatcct
aatacaggaaagctgctgatcagcaaccacgtaccatatggttcattcctgcatgtgaat
gaaggacaggtagttgaaaagggcgcgatcctgtgtaactgggacccttataacgcggtt
atcctttccgagttcgatggcgaaatctcttacgaatccatcatcgaaggtgttacttac
cgtgaggagtcagatgagcagacaggttaccgtgagaaggtaatcatcgacacgaaagac
aagacgcagaaccctgctattgtggtgaacccgaaaaacggtgagccgaaaggctataac
attccggtaggtgctcacttgactgtagagaacggcgagaagatcaaagctggacagatc
ctggtgaagataccgcgtgctatcggtaaaacacgagacattacgggtggtctgccacgc
gtgacggagttgttcgaagcgcgtaacccgtccaacccggcggtagtgtctgagatcgac
ggtgtggttacatacggtagcgtgaagcgtggtaaccgtgaaatcttcatcgagtcgaaa
gacggcgtgaagaagaaatacatggtgccgctttccaagcacatcctggtacaggataat
gactttatccgtgcgggtatgccgttatcagacggagcgatcacgcctacagacattctg
aatattcaaggcccgggtgcggtacaagagtacctggtaaatgagattcaggaagtatac
cgtctgcagggtgtgaagatcaacgacaagcacattgaggttgtcgtgcgccagatgatg
cagaaagtagtggtagtggatgctggtgataccagcttcctggagaatcaaacagttgat
aagatcagcttcatggaagagaacgaccacatcatcgacatgaaagttgtggaagatgcc
ggagactcgaccaacctgaagccaggtcagattgtgacacctcgtcgcctgcgcgatgag
aactctagcctgaagcgccgtgacctgcgcctggtgacagtgcgcgatgcacagccagcc
gtttctcgtcctacgctgcagggtattacacaggcgtcactgggtacgcaaagctttatc
tcggctgcctcgttccaggagactacgaaagtactgagcgaagccgctatcaaaggtaaa
gccgacgaactacttggactgaaggagaacgtgatcgtaggtcacctgatcccagccggt
acgggtctgcgtgaataccagaacctgatcgtgggtagccaggaagagtatgatgcgctg
gtggagtctaaaaagacaacagcgagaacaaagcagcaagagttgcaaaataaataa
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integrated database retrieval system
