Pontibacter actiniarum: CA264_20365
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Entry
CA264_20365 CDS
T05632
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pact
Pontibacter actiniarum
Pathway
pact03030
DNA replication
pact03430
Mismatch repair
pact03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pact00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CA264_20365
03430 Mismatch repair
CA264_20365
03440 Homologous recombination
CA264_20365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pact03032
]
CA264_20365
03400 DNA repair and recombination proteins [BR:
pact03400
]
CA264_20365
Enzymes [BR:
pact01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CA264_20365
DNA replication proteins [BR:
pact03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CA264_20365
DNA repair and recombination proteins [BR:
pact03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CA264_20365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
ARS37590
UniProt:
A0A1X9YXB0
LinkDB
All DBs
Position
complement(4690328..4693951)
Genome browser
AA seq
1207 aa
AA seq
DB search
MPVFSHLHTHTQYSLLDGQASISALMKKAQADGMPAVAMTDHGNMFAAFNFVAEANKYNV
KPIVGCEFYLVKDRHLKTFSKEVKDVRHHQLLLAKDQEGYQNLAKLCSLSYIEGVYSKWP
RIDKELLLKYSKGLIATSCCIGAEVPQAILWKSEEEAEEIFKWWLDVFGEDYYIEIQRHG
LQNIDGTGKSQEDINQVLLKWAKKYNVKVICTNDSHYVDQEDWNAHDILLCVNTGEDQST
PVGDFQTKYYRFLSDDQKVIYDTVENVRSKYSNHSTVRQMLNRIDEAGPKTRFGFPNDQF
YFKTQAEMNELFKDVPEAVDNTNEIVDKITPPKLKRDILLPNFPIPPEHAGPDAFLRHLT
YEGAKKRYTDITPDVEERLDYELRIIETMGFAGYFLIVQDFINRGRDMGVFVGPGRGSAA
GSAVAYCIGITNIDPIKYNLLFERFLNPERVSMPDIDIDFDDVNRQRVIDYVVDKYGKTQ
VAQIITFGTMAAKSSIKDVARSTSLPLAEANELAKMVPDTPGTTLAKAFMENLDLAAIRE
GTDHRAAVLKLAEKLEGSVRNTGIHAAGVIIAPDDITNYIPVSTSKDADLLVTQFDGKVI
ESAGMLKMDFLGLKTLTIIKDALELIKKNHGVEIDIDEIPIDDEKTYQLYQRGDTIGTFQ
FESEGMRMYLKDLQPTNIEDLIAMNALYRPGPMQFIPNFINRKHGREDVEYPHELLEPIL
NYSYGIMVYQEQIMQTAQILAGYSLGGADLLRRAMGKKDMKKMAEEREKFIAGAAEIHKI
PSKKASEVFDVMEKFAQYGFNRSHSAAYSVVAYQTGYLKAHYPAEYMAAVLTNNMNDIKK
VTFFIEEARKQGVAVLGPDVNESLLKFNVNEQGQIRFGLAAIKGTGESAVDAIISEREAN
GMYQDIFDFSKRVNLRAVNKKTFESMALAGCFDSWELYHRAQLMEVPEGESMSLLEKAVR
YGNNYQAEQQAAQQSLFGGSAAVAAPMPKIPEVQPWTQAEMLRREKEVVGFYMSGHPLDQ
FKLEIDSYCTCALSNIEEYKNRDVNVAGMVTDVVIRTAKNGNPFALFTIEDYDTTMQMAL
FGEDYVKFSPYLKIGLYLFIRGKVQLRYKTEDQWELKPQNIQLLGDVMDKMAQGVQLNIN
LQHFTPNLAEALEGAIVASVGQKRLEITLHVPEEKLALPTYSRKYRIDPKLFITSIKDMG
LGECKLI
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgcctgttttttcgcatttacatacccacacacaatactcgctgctcgacggccaggcc
agcatcagtgcgctcatgaaaaaagcgcaggccgatggtatgcctgccgtagccatgacg
gaccacggaaacatgtttgccgccttcaactttgtggccgaggcaaacaagtataacgtg
aagccgattgtgggctgcgagttttacctggtgaaagaccgccaccttaaaaccttcagc
aaagaggtaaaggatgtgcgccaccaccagttattgctagccaaagaccaagaaggttat
cagaacctggccaagctttgctcactctcctacatagaaggtgtgtacagcaaatggccc
cgcattgataaagaactgctgctgaagtatagcaaaggccttattgccaccagctgctgt
attggtgccgaagtgccacaggctatactttggaagagcgaagaagaggccgaggaaatc
tttaaatggtggctggatgtgttcggggaggattattatatcgagattcagcgccacggc
ctgcagaacatagatggcaccggcaaaagccaggaagacataaaccaggtgctgctaaag
tgggcgaagaagtataacgtaaaagttatctgcaccaacgactcgcactatgtagaccag
gaggattggaatgcgcacgatatcctgctgtgcgtaaatacaggcgaagatcaaagcaca
ccagttggcgatttccagacaaagtattaccgctttttgtctgatgaccagaaggtaatt
tatgatacggtggagaacgtgcgcagcaagtatagcaaccactccactgtgcgccagatg
ctgaatcgtattgatgaggccggtccgaaaacacgctttggcttcccgaacgaccagttc
tacttcaaaacgcaggccgaaatgaacgagctgttcaaggatgtgccggaggctgtagat
aacaccaacgagattgtagacaagatcacgccgccaaaactgaagcgcgatatcctgcta
ccaaacttcccgataccacctgagcacgctggtcctgacgctttcctgcgccacctcact
tatgagggagccaagaagcgctatacagacattacccctgacgtagaggagcgcctggat
tatgagctgcgcattatcgagacgatgggctttgccggttacttcctcatcgtgcaggac
ttcattaaccgtggccgcgatatgggcgtgtttgtggggcctggtcgtggttcggcggct
ggttctgcggtggcttactgcattggtatcaccaacatcgatccgatcaagtataacctg
ctgttcgagcgattcctgaacccggagcgtgtgtcgatgcccgatattgatattgacttt
gacgacgtgaaccgccagcgtgtaattgactacgtggtggacaagtatggcaaaacgcag
gtagcccagattattacctttggtacgatggcggctaaatcatccatcaaagacgtggcg
cgttctacctctttacctttggcagaagccaacgaactggcgaagatggtgcctgatact
ccgggtacaacactggcgaaggcctttatggagaacctggatctggctgctatccgtgag
ggtactgaccaccgtgctgccgtactgaagctggccgaaaagctggaaggctctgtgcga
aacacaggtatacacgccgcaggtgtaatcattgccccggacgatatcacgaactacatc
ccggtttcgacttctaaagacgccgacctgctggtaacgcagtttgatggtaaggtgatt
gagagtgccggtatgctgaagatggactttctggggctgaaaaccctaaccatcatcaaa
gatgcactggagcttatcaagaagaaccacggcgttgaaatcgacatagatgaaattccg
atagatgacgaaaagacgtaccagctttaccagcgcggtgataccattggtacgttccag
ttcgagtcggagggtatgcgcatgtacctcaaggacctgcagcctaccaacattgaagac
ttgattgccatgaacgccctttaccgaccgggcccgatgcagttcatcccgaacttcatt
aaccggaagcatggcagagaggacgtagaatacccgcacgagctactggagccaattctg
aactactcgtatggtatcatggtgtaccaggagcagatcatgcagacggcccagattctg
gcaggttactcgctgggtggtgccgacttgcttcgccgagctatgggtaagaaggacatg
aagaagatggccgaggagcgtgagaaattcatagccggtgccgccgaaattcataagatt
ccttctaagaaggcttctgaggtgttcgacgtgatggagaagtttgcccagtacggcttt
aaccgctcccactccgctgcttattctgtcgtagcttatcaaacaggctacctgaaggcg
cactaccctgctgaatacatggctgctgtgcttaccaacaacatgaacgacatcaaaaag
gtgacgttctttatcgaggaagcacgcaagcaaggtgtagctgtacttggccctgacgta
aacgaatccttgctgaagttcaatgtgaacgagcaggggcaaatccgttttggtctggct
gcgataaaaggaaccggtgagtctgcggtagatgccattatatcagagcgcgaggcgaac
ggcatgtaccaggatatttttgacttctctaagcgtgtaaacctgcgggcggtaaacaaa
aagacctttgaaagtatggcattggctggttgcttcgactcatgggagctttaccaccgc
gcccagctaatggaggtgccggaaggcgaaagtatgagtttgctggagaaagccgtgcgc
tacggtaacaactaccaggcagagcaacaggcggcacagcaatcactttttgggggtagt
gccgccgtggcagcgccaatgcctaaaatacctgaagtacagccctggacgcaggcagag
atgctacgccgtgagaaagaggtggtaggcttctacatgtcgggccacccgctcgaccag
tttaagctggagatagactcctattgcacttgtgccctttcgaacatcgaagagtataaa
aaccgggatgtgaatgtggccggcatggtaaccgatgtggttatcagaacggctaaaaac
ggtaatccctttgcgctcttcactatagaagattatgacaccaccatgcagatggcgctg
tttggagaggactatgtaaagttctcgccttacctgaagataggtttatacttgttcatc
aggggcaaagtgcagctgcgctataaaaccgaggaccagtgggaactgaagccgcagaac
atacagttgctcggcgatgtgatggacaagatggcacagggcgtacagctcaacatcaac
ctccagcactttacaccaaacctggccgaggcgttggaaggtgccattgttgcgagtgtc
ggacaaaagcgcctggaaatcacgctgcacgtgccggaggagaaactggccctgcccacc
tactcccgcaagtatagaattgatccgaagctgtttataacgtcgatcaaggatatgggg
ctgggtgagtgtaagctaatctag
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