Paenibacillus sp. Cedars: B9D94_12820
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Entry
B9D94_12820 CDS
T11713
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pacu Paenibacillus sp. Cedars
Pathway
pacu00100
Steroid biosynthesis
pacu00909
Sesquiterpenoid and triterpenoid biosynthesis
pacu01100
Metabolic pathways
pacu01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pacu00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
B9D94_12820
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
B9D94_12820
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pacu01006
]
B9D94_12820
Enzymes [BR:
pacu01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
B9D94_12820
Prenyltransferases [BR:
pacu01006
]
Terpene biosynthesis
Squalene/phytoene synthase
B9D94_12820
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
AWP27449
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Position
2427459..2428292
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AA seq
277 aa
AA seq
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MEGVVINNVALNEAMTMLKKTSRTFYIPISYLELGLREAVASAYLCMRAIDEIEDHHELS
NELKIELLRGIYETFKSQDDRMGVPQAHIVLSPYRTVLPDVTMQLDEWAALCPPTAAPIV
YRYTAKMSLHMADWVQHGWNIHTEEDLDKYTYSVAGMVGEMLSELWLWYDGTQSDLTKAV
AFGRGLQAVNILRNREEDLKRGVDFYPDGWGFKEMQQYTRRNLQTADSYVADLKHGPALK
FCKIPLALAHATVNLISAGGSKLTRDAVLKIVNRVTG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
ttggagggagtagtcattaataacgtcgcattgaatgaagcaatgaccatgctaaagaag
acgagccgaacgttttatatacccataagttatttggaattaggcttaagggaggctgtt
gcctctgcctatctatgcatgcgggcaatagatgaaatcgaggatcatcatgagctctcg
aatgaactgaagatcgaactgcttcgtggcatttatgaaacatttaaatcccaggatgat
agaatgggtgtaccgcaagcacatattgtactatcaccctatcggacggtattaccggat
gttacgatgcagctggacgaatgggccgctctgtgtccccccaccgcagctccaatcgta
tatcgttacactgctaagatgtcgttacatatggctgactgggttcagcacggatggaac
attcataccgaagaggatttggacaaatacacctacagcgttgccggaatggttggtgaa
atgctgtcagagctttggttatggtatgatggaacgcaatccgatttaacgaaggccgtt
gctttcggaagagggctgcaagcggtgaatattctccgaaatcgggaggaggatcttaaa
cgtggcgttgacttttatcctgacggatggggattcaaggaaatgcagcagtacactcgg
cgcaatttgcaaaccgcagactcttatgttgcagacctgaaacatggtccagcattaaaa
ttttgcaagattccactggcgttagctcacgctacggtgaacctcatctccgcaggtgga
agcaaattaacaagagatgccgttctgaaaattgtaaatcgtgtgacaggataa
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