Paenibacillus sp. Cedars: B9D94_18275
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Entry
B9D94_18275 CDS
T11713
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pacu Paenibacillus sp. Cedars
Pathway
pacu00300
Lysine biosynthesis
pacu00470
D-Amino acid metabolism
pacu01100
Metabolic pathways
pacu01110
Biosynthesis of secondary metabolites
pacu01120
Microbial metabolism in diverse environments
pacu01230
Biosynthesis of amino acids
Module
pacu_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pacu_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pacu00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B9D94_18275
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B9D94_18275
Enzymes [BR:
pacu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
B9D94_18275
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AWP28446
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Position
complement(3612686..3614017)
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AA seq
443 aa
AA seq
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MFLHGTSKINDQGHLEIGGCDTSDLKAQYGTPLYIVDEQSVRNRCREYIEAFNASGLKFQ
VAYASKAFCVMAMCRLADEEGMSLDVVSDGELYTALQAGFPAERIHFHGNNKTPEEIEMA
LDAHIGCFVVDNVIELHMLQAIAAEKNRTVNILLRVTPGVEAHTHEYISTGQTDSKFGFD
IGNGSAYEAVKLAEAQGNINLMGIHSHIGSQIFEVEGFQMAVQRVAEFAFSVKEGLGVVF
KVVNLGGGFGIRYVDGDTPLQVSQYVKAITDAVKTHFAGLGSELPEIWVEPGRSIVGDAG
TTLYTVGTSKDIPGVRKYVAVDGGMTDNPRPALYESKYEAVLANRANDKVEETVSIAGKC
CESGDMLIWDLDLPKVETGDLLAVSCTGAYNYSMASNYNRIRKPAVVFVKDGQSNLVVRR
ESLADIISNDIVPANVAKETVTS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgtttttacacggtacaagtaagatcaacgatcaggggcatttggaaatcggcgggtgc
gacacatccgatttgaaagctcaatatggaacaccactatatattgtagacgagcagtcg
gtgcgcaaccgctgtcgggaatatatcgaggcattcaatgcttccgggttgaaattccaa
gtcgcgtatgcaagcaaggcgttttgcgtcatggctatgtgccgcttggcggatgaggaa
ggcatgtcgcttgacgtggtttccgatggcgagctgtacacagcgctgcaagcaggattt
cctgcggaacggattcatttccacgggaacaataagacgccggaagagattgaaatggcg
cttgatgcacatatcggctgttttgtagtggataacgtgattgaactgcacatgctgcag
gccattgcagccgagaagaaccgcaccgttaacattctgcttcgcgtgacaccgggtgtt
gaggctcatacgcatgagtatatctccacaggtcaaaccgactccaagtttggttttgat
atcggtaacggctccgcatatgaagcggtaaagcttgcagaagcacaagggaacattaac
ttgatgggcattcattcccacatcggctcccagatttttgaggtggaaggcttccagatg
gccgttcagcgtgttgccgagtttgctttttctgtaaaagaaggcttgggcgttgtgttc
aaggttgtaaatcttggcggcgggtttggtatccgttatgtggatggagacactccgctt
caagtatcccagtatgtaaaagcgattacggatgcggtgaaaactcactttgctggtctg
ggttccgagcttcctgaaatttgggtggagccgggccggagcatcgttggcgatgcaggc
accacgctgtacacggtgggcacaagcaaggatattccaggcgtacgcaaatatgttgcc
gtagatggcgggatgacggacaatcctcgtccggcgttgtatgaatcgaaatatgaagca
gtgcttgccaaccgtgctaacgataaggttgaagaaaccgtgtccatcgctggcaaatgc
tgtgagagcggggatatgctcatctgggatctggatcttccgaaggtagagacaggtgat
ttgctggctgtatcctgtacaggtgcctacaactactctatggcaagcaactacaaccgg
atccgcaagccggcagtcgtatttgtgaaggatggccagagcaatctggtcgtacgtcgc
gagtcgcttgcagacatcatcagtaacgacatcgtgcctgcgaatgtggcaaaagaaacc
gtaacgagctaa
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