Paenibacillus sp. Cedars: B9D94_20775
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Entry
B9D94_20775 CDS
T11713
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pacu Paenibacillus sp. Cedars
Brite
KEGG Orthology (KO) [BR:
pacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pacu03400
]
B9D94_20775
DNA repair and recombination proteins [BR:
pacu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B9D94_20775
Archaeal homologous recombinant proteins
B9D94_20775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
MMR_HSR1
DUF87
Motif
Other DBs
NCBI-ProteinID:
AWP28904
LinkDB
All DBs
Position
complement(4099686..4103135)
Genome browser
AA seq
1149 aa
AA seq
DB search
MKPILLKLSGLQSYRSTQEIDFETLCETGLFGIFGPTGSGKSTLLDAITLAMYGKVERAV
NGTQGIMNHSEDSLSVSFTFELSSAAGLERYRVERRFKRVNELSISNTISRFIQVTPEGE
QVMADKLADVTRCVEEKIGLKMDDFTRAVVLPQGKFAEFLSLKGSDRRQMLQRLFHLERY
GDQLAMKLSRRVKDTDGALKSIEAEQQGLGSAGKEALAEAKTALEDAKKLAVSSRSRLQA
TIEAHEALGKIRELDMEKQRLLGKLDELSAQEEEIKRLEHRLELTGAAAAVLPALETWRD
TGKTWETRLRHAEGLTKQAAAAQQAAEQAGTADEAAQAALIAEEPKLVLREQQLEQAVLL
QQERDVLSNELARLDVQRADARKEFETVGVQLQKEQELLERGRRRREELQDKLKGLETRS
GERQALHAAMQKVQALEAARKHKEKAEHELKQQEIKLKEQELRLSMLQKQEVELQQRYIK
LSAHAGNLQRSAAEVAAFADRTAVAASQVNQAMNQLLREKQLHDLSMSLALELQEGKPCP
VCGSEHHPLPAAASEPSDTTSDENLDRLSRIAHQIQEIRLTLRGQLNEAESLVSHLNAQT
EPFAGSELLLEGPREEQDEAWVEAAASGVLVVETPYDVERLASDTAWLVQRAEAQAAAIG
QCRMEASKAQQSLHACQQELMKQNAAAENGHMTVNQLRDQLAGLEAETADIQSLWQEDNP
AFPLEETADRFQLMQQKDAESESIREGLERSVPFIEEKQQAVLRLEQKLRELEKLLIQWD
AQREGKAEVLKDKKERLQAWIGERSAEELLSECRSRLKLLKESAEQARGKRRKADEAAQL
AAKEAALAEQAANAAQELYLAAKLAWEKQLEASPFVTEAAVMEACLSESETERCAQLVKA
HREGQREWTLRLRDVEQKLGTDPFRQEEWERSSAELQAARTADEEAVRAKARAERDLEDL
EKRHIRFMELEELRLGLQRESERLSKLQSCLRGNAFVEYIAEEQLMQVSQSASQRLRFLT
KQRYSLEVDSGGGFVIRDDANGGVRRPVSTLSGGETFLTSLALALALSAQIQLRGQYPLQ
FFFLDEGFGTLDPELLETVITALERLHNDKLTVGIISHVPELRARLPRKLVVRPAEQAGE
GSQLAIESL
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgattctgttgaagttatccggtttgcagagctaccgcagtacgcaggaaatt
gattttgaaacgttgtgtgaaaccggacttttcgggatattcggtccgactggaagcggg
aaatccacactgctagatgccattacactggctatgtacgggaaagtggagcgcgcggtt
aacggcacccagggaatcatgaaccattcggaggacagcttgtctgtctcctttacgttt
gagctttcttctgctgccgggctggagcgataccgggtagagcggagatttaaacgagtg
aatgagctctccatcagcaatacgatcagccgttttatccaagttacacccgaaggggag
caagtgatggcggataagctggccgacgtcacccgctgcgtagaagagaaaatcggattg
aagatggacgattttacccgtgcggtcgtgctccctcaagggaaattcgccgaattccta
tccctgaagggcagcgatcgcaggcagatgctccagcggctgtttcatttggagaggtac
ggagatcagcttgccatgaagctcagccgccgggtgaaggatacggacggtgccctgaaa
tccatagaagcggagcagcaagggctgggcagcgcgggcaaagaggctttggcagaagcg
aaaacagcgctggaagatgctaagaaactcgctgtatcctcccgcagccgtctccaggcc
acaattgaggcgcatgaagctctgggaaaaattcgcgagctggacatggagaagcaacgg
ttgttgggcaagctggatgaattgtctgctcaagaggaagagattaagcggctggagcac
cggctggagctgacgggagcagctgccgctgtcctccctgcgcttgagacgtggcgtgat
accggcaaaacgtgggaaactcggctcaggcatgccgaggggctcaccaagcaggctgca
gcagctcagcaggctgctgaacaggcgggcacagcagatgaagctgcccaggcagcgctc
atcgcagaggagccaaagctcgtgctgcgtgagcagcagctcgagcaagctgtcttattg
cagcaagagcgggatgttttgtccaacgagttggcccggttggatgtacagcgagcggat
gcccgcaaagaattcgagacggtgggcgtgcagctccagaaggagcaggagctgcttgaa
cgaggacgcagacggcgggaggagctgcaggataagctcaaagggcttgagacccgctca
ggtgagcgtcaggcgcttcatgcggcgatgcagaaggttcaggcactggaggcagcccgt
aagcataaggaaaaggcagaacacgaactgaaacagcaggagatcaaactcaaggagcaa
gagttaaggctcagtatgctgcagaagcaggaagtggaactgcagcagcgatacataaag
ctctcggcacatgccggcaatctgcagcgttctgccgctgaagttgcggcgtttgccgac
cggactgcagttgcggccagccaggtaaaccaggcgatgaatcaattgcttcgtgaaaag
cagcttcatgatttgtccatgtcgctggctcttgagctacaggagggtaagccttgtccc
gtatgcggaagcgagcatcaccctcttcctgcggcagcttcggagccgtctgatacgacc
tctgacgagaacctggatagactgtcacggattgcacatcagatacaggaaatccgattg
accctgcgggggcagcttaacgaagcggaatctctggtgagtcatttgaatgcccagacg
gagccgttcgctggaagcgaactccttctcgagggccctcgtgaggagcaggacgaagca
tgggtggaagctgcagcctcaggagtgcttgttgttgaaacaccgtacgatgtggagagg
cttgcttcagacactgcatggctggtgcaaagagcggaagcacaggcagctgccattggg
cagtgccgcatggaggcgtccaaggctcagcagagcctccacgcctgccaacaggagctc
atgaagcagaatgctgcggctgagaatggtcatatgacagtgaaccagctgcgcgatcag
cttgcaggcttggaagccgaaactgccgacattcaaagtttatggcaggaggacaacccg
gcatttcctttggaagagacggctgatcgttttcagctcatgcagcaaaaggatgcggag
tccgagtccattagggaagggcttgaacgaagcgttcccttcattgaggagaagcagcag
gcggtcctccgcctggagcagaagctccgtgagctggagaagctgctgattcagtgggat
gcccagcgtgagggcaaagctgaagtgttgaaagacaagaaagagcgccttcaggcatgg
attggggaacgatccgctgaagagctgttgagtgaatgccgatccagattgaagcttctg
aaggaatccgctgagcaagccagaggcaagcgcagaaaggccgatgaggcggcgcagctt
gcagccaaagaagcagctcttgcagaacaggctgcaaacgccgcacaggagctgtatctt
gctgccaagcttgcatgggagaagcaactggaagcctcgccgtttgttacggaggcagcc
gttatggaagcctgcttatccgagagcgaaaccgaacgatgtgcccagctggtgaaggcg
catcgtgagggacaacgggaatggacgctaaggcttcgggacgtcgagcagaagctcggc
accgatccattccgtcaagaggaatgggaacgaagctctgccgagcttcaggcggctcgt
acggccgatgaggaggccgtacgggcgaaagccagagcggagcgggacctggaagatttg
gagaagcgacatatccggtttatggaattggaagagctgcgccttggccttcaacgggaa
agcgagcgcttgtccaaactgcagtcctgcttgcgaggcaatgcattcgtggaatacatt
gcggaggagcagctgatgcaggtgagccagtctgcttcccagcgtcttcgctttttgacc
aagcagcgctactcgcttgaggtggattccgggggaggctttgtcattcgggatgacgcc
aacggcggcgtaaggcggccggtatccactctatccggcggtgagacattcttaacctcg
ctggccttggctttggcgctttcagcgcagattcagcttcgggggcagtatccgctccag
ttcttcttccttgatgaaggctttggcaccctggatccggaactgctggagacggttatc
accgctctggagcggcttcataatgataagcttaccgtcggcatcatcagccacgtgcca
gagcttcgggcgcgtttgccacggaagctggtcgtgcggcctgcggagcaggctggagaa
ggatcgcagcttgcgatcgaatcgctgtag
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