Paenibacillus sp. Cedars: B9D94_21880
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Entry
B9D94_21880 CDS
T11713
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
pacu Paenibacillus sp. Cedars
Brite
KEGG Orthology (KO) [BR:
pacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pacu03019
]
B9D94_21880
03009 Ribosome biogenesis [BR:
pacu03009
]
B9D94_21880
Messenger RNA biogenesis [BR:
pacu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B9D94_21880
Ribosome biogenesis [BR:
pacu03009
]
Prokaryotic type
rRNA processing factors
B9D94_21880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
AWP29099
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All DBs
Position
complement(4348073..4349305)
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AA seq
410 aa
AA seq
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MRQMIVHCEHETIQMALIEDGRLAEFAVERSREESVVGSFYKGRVVNVLPGMQAAFVDIG
LKKNAFLYIDDVLHPHLEKQPKQKPSISQLLTVGQELTVQVMKEPRGGKGARVTTHFSLP
GRCMVYMPTADYVAVSKKIGREAERARLKSIGEQLRTDEEGIIIRTVSEDEPLEFLSGDL
EYLRKEWTRILEKAESSSAPALLHRDLGLLQRFIRDSFDPLHDELVIDSMLKGEETKSYL
KETVPGMEPKVTYHTGGGPIFQAYGLDEQMKAGFARKITLPEGVTIVVDQTEAMTIMDVN
TAKYIGGDNFEETVLKTNLMAAQQIARTLRLWDIGGIIIVDFIDMDREEHRQQVVSVMEA
VMRKDRTKSFVVGWTKLGLLEMTRKKARENSSLPFAKPCVVCGGKGIVVE
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaaatgatagttcattgtgaacatgagaccatacagatggccctcatcgaagat
gggaggttagccgagttcgcagttgagcgaagtcgtgaggagagtgtagtcggaagtttt
tacaagggcagggttgttaacgtattgccggggatgcaggcggcttttgtagatatcggg
ctgaaaaagaatgcatttttatatattgatgatgtgctccatcctcatttagagaagcag
ccgaagcagaagccatcgatctcgcagctgctgacggtcggacaagaactgacggtacag
gttatgaaggaaccaagagggggcaagggagcaagagtaacgacacatttctcgcttccc
ggcaggtgtatggtgtatatgcctacagcggattatgtggccgtctccaaaaaaatcggg
cgtgaagccgagcgtgcccgtctgaagagcattggtgagcagcttcgcacagatgaagag
ggaattattatccgaaccgtatccgaggacgagcccttggaatttcttagcggcgatctg
gaatacctgagaaaagaatggactcggattctggagaaggcagaatcatcgtcagctccg
gcactgctgcatcgggatttgggtttgctgcagcgctttattcgggattccttcgatccg
cttcatgacgaacttgtgatcgatagtatgctgaaaggcgaggaaaccaaaagctatctg
aaagagacggttcccggtatggagcctaaggttacataccacacgggaggggggccgatt
tttcaggcttatgggttggacgagcagatgaaagccggcttcgcaagaaaaatcacgctt
ccggaaggtgtgaccatcgttgtagaccagacggaagccatgaccataatggatgtaaat
acagccaaatatatcggtggcgataatttcgaggaaacggtgcttaagacaaatcttatg
gccgcacagcaaattgcaagaactttgcgtttgtgggatatcgggggcatcattatcgtt
gatttcattgatatggatcgcgaggagcatcggcagcaggtggtatccgtcatggaggcc
gtaatgcgcaaagaccgcacgaagagttttgtggtagggtggaccaagctgggtctgctg
gaaatgacccgtaaaaaagccagggaaaactcttcgctcccatttgccaagccttgcgtt
gtttgcggaggcaaaggcattgttgtcgagtaa
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