Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_03985
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Entry
TIIST44_03985 CDS
T01972
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TIIST44_03985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_03985
Enzymes [BR:
pad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
TIIST44_03985
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
TIIST44_03985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AER05306
LinkDB
All DBs
Position
complement(848952..849749)
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AA seq
265 aa
AA seq
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MTKWIIGGHVDTADAVTQAAARGADIAQISLGDPKSWKKPVCDFPGGSLALREAAGEAGL
TLVVHSAFVINVASLNNRIRIPSRKLLQQTLDAAAEVGAMGVVVHGGHVRAGEPIEKGQD
NWRKAIDGLEMSVPLFVENTAGGDNAMARFLERLSGTWEAIGAASGHENVGFCLDTCHAF
AAGLDMASLVDDVRGITGRINLVHANDSQGAVGSGRDRHANLGEGQCEADTLVGVIRAAE
APVVVETPGEAEGQARDIAWLRERL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtggatcattggcggtcatgttgacaccgctgacgccgtaacgcaggcggca
gcacgtggagccgacatcgctcagatcagcctgggcgatccgaagtcttggaagaagccg
gtgtgtgactttcccggcggctcgctggcgctgcgggaggccgctggggaggctgggctg
acgctggttgtgcactctgctttcgttatcaacgtcgcttccctcaataaccgtatccgc
attcctagtcgcaaactgttgcaacagaccctggatgccgctgctgaagttggggcgatg
ggggttgtcgtccatggtggccacgtgcgtgccggggagccgattgagaaaggtcaggac
aactggcgcaaggctattgacggccttgaaatgtcggtgccgctattcgtcgaaaacacc
gccggtggggacaatgcgatggcgcggttcctggagaggttgtcgggtacgtgggaggcc
atcggtgccgcgtcagggcacgagaacgtcgggttctgtctggatacctgccacgctttc
gcggccggtctcgacatggcgagtctggtcgacgatgtgcgtggcattacgggtcggatc
aacctggtgcacgctaatgattctcagggtgctgtcgggtcggggcgggatcgccacgcc
aacctgggggagggtcagtgcgaggccgataccctcgtcggtgtcatccgtgctgcggag
gccccggtcgtcgtcgagaccccaggggaggctgagggccaggcccgcgacatcgcctgg
ctgcgtgagcgcttgtga
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