Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_05900
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Entry
TIIST44_05900 CDS
T01972
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pad03032
]
TIIST44_05900
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_05900
Enzymes [BR:
pad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TIIST44_05900
DNA replication proteins [BR:
pad03032
]
Prokaryotic type
DNA Topoisomerases
TIIST44_05900
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TIIST44_05900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AER05669
LinkDB
All DBs
Position
1284788..1287580
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AA seq
930 aa
AA seq
DB search
MSPTKSLVIVESPHKATMIAGYLGPKYTVRASQGHVRDLPTSASEVPAKYKGEPWARTGV
NVDNEFTPVYVVSPEKRSTIRELKSLLKDADELLLATDGDREGEAIAWHLLDELKPKVPV
RRMVFNEITEKAINEAVAHTRELDTDLVDAQETRRILDRLYGYEVSPVLWKKVLPRLSAG
RVQSVATRLVVDRERERMAFTSANYWDMEATLTADLDEFQARLVSLDDTKIATGRDFDSH
GNLTSSVRRLGEVAATAIAKALEKAPFTVTKVESKPYTRRPYAPFRTTTLQQEAGRKLGF
TSQRTMSVAQNLYEGGYITYMRTDSVALSQEAIHAARNQAAELYGSDHIPDKPRIYASKV
KNAQEAHEAIRPAGEHFRTPAETGLTGDEFRLYELVWMRTLASQMADAKGETLSVTIDAT
PVSPVNLPDGDVTTATFTASGRTITFHGFLRAYVESVDEGASDDAQKRLPQLSKGQDLDP
REVTAKGHDTRPPARYTEPSLVAKLEELEIGRPSTYASIIRTITSRDYVFKKGSALVPTW
LAFAVTRLLEEHFSNLVDYQFTADMEETLDQIARGNADRVAVLSAFYFGQTKTDDGDVPT
PTEGHEGLHQLVTELGDIDARTICTFPLDDSDVVVRVGRYGTYVEDPEGNRANVDDALPP
DELTVEAAKELLVSPNGQDRELGLDPYSHRPIVARNGRFGPYVTEVLDDDEATEIVETTT
KDGKKRRTKHKVKPRTASLFRSMSLETVTLDEALKLLSLPRVVGTAADGTEITAQNGRYG
PYLKKGTDSRSLGSEDEIFSITLEQAEAIYAQPKQRGRAAAKSPLRELGEDPTSGRPIVV
KDGRFGPYVTDGQTNATLRKDDSVEDITPERAQELLAEKRAKGPAKKSPTKKKTTRKTTT
RKTTTKKSTTKATSKSVKVTKANAKTSSGS
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccgaccaagagcctcgtcatcgtcgagtccccccataaggccacgatgatcgcc
gggtacctggggcccaagtacaccgtgcgagccagccagggtcacgtgcgcgacctgccc
accagcgcatccgaggttcccgccaagtacaaaggggagccatgggcgcgtaccggagtc
aacgtcgataacgagttcaccccggtctacgtcgtttctccagaaaagcggtcgacgatc
cgcgaactcaagagcttgctcaaggacgctgacgagctcctgctcgctaccgatggtgac
cgcgagggggaggccatcgcctggcatttgcttgacgagctcaaaccgaaggtgccggtg
cgccgcatggtgttcaacgagatcaccgagaaggccatcaacgaggccgtcgcccatacc
cgagagcttgatacagacctcgttgatgcccaggagacccgacgcatccttgaccgtctc
tacggttacgaggtgtccccggtgttgtggaagaaggtactgccacggctgtcggcaggt
cgcgtgcagtcggtggctacccggctagtcgtcgaccgtgagcgcgagcggatggcgttc
accagcgcgaactactgggacatggaagccaccttaaccgccgacctggatgagtttcag
gcccgcttggtttccctcgatgacaccaagatcgccaccggccgcgacttcgactcccac
ggcaacctcacttccagcgtgcgccgccttggcgaagttgccgcgaccgctatcgcgaag
gccctcgaaaaggctccgttcaccgtcaccaaggtggaatccaagccgtacacccgccgc
ccttacgctcccttccgcaccacgaccttgcagcaggaggcaggccgcaagctcggcttc
acctcccagcgcaccatgtcggtcgcccaaaatctctacgaaggcggctacatcacctac
atgcgtaccgactcggtggccctgtctcaggaggccattcacgcggctcgcaaccaggct
gccgagctctatggttccgaccacattccggacaagccgcgcatctacgcctctaaggtg
aaaaacgctcaggaagcccacgaggccatccggcctgctggcgaacacttccgcacccca
gctgaaaccggcctgaccggtgacgagtttaggctttacgagctggtctggatgcgtacc
ctggcctctcaaatggccgacgccaagggcgaaaccctttcggtgactattgatgctacc
ccggtctcgccggtaaacctgcccgacggcgatgtcaccaccgctaccttcaccgcgtct
ggacgcaccatcactttccatggtttcctgcgcgcttacgtcgagtccgtcgacgaagga
gcttccgatgacgcgcagaaacgtctgcctcagttgtcgaagggacaggatctagaccca
cgcgaggtgaccgctaaggggcacgacacccgcccgccggcccgctacaccgaacccagc
ctggtggcaaagctcgaggaactagagatcggtcgcccatcgacgtacgcatcaatcatc
cgcactatcaccagccgtgactacgttttcaagaagggctcggccctggtgccgacctgg
ctagcgttcgccgtcactaggctgttggaggaacacttttccaacctcgtcgactaccag
ttcaccgccgacatggaggagaccctcgaccagatcgcccgtggtaatgccgatcgggtg
gcggtgctctcagccttctactttggccagaccaagactgacgacggcgacgtcccgacg
cccactgagggccacgaggggctgcatcagcttgtcactgagcttggtgacatcgacgcg
cgcacgatctgcaccttcccgctcgacgactctgacgtcgttgtccgggtgggccgctac
ggtacctacgttgaggatccggagggcaatcgagctaatgtcgacgacgctctgccccct
gacgagctcaccgtcgaggccgccaaggagctgctggtaagcccgaacggtcaggaccgc
gagctcggtctggatccgtacagccatcgtccgatcgtggcccgcaacgggcgtttcggc
ccttatgtcaccgaggtccttgacgatgacgaggccactgagatcgttgagacaacaacc
aaggatggcaagaagcgtcgcaccaagcacaaggtgaagccgcgcactgctagcttgttc
agatcgatgagccttgagaccgtcacccttgatgaggctctcaagctgctttcactgccc
cgggtggtcggaacggctgccgacggcaccgagatcactgcgcagaacgggcgctacggc
ccctatctcaagaagggaacggactcgcgttccttaggcagcgaggacgagatcttctcc
atcactttggagcaggccgaggctatttacgcccagcctaagcagcgcggtcgtgctgcg
gctaaatcgccgttgcgcgagcttggcgaggatccgacctcgggacgcccgatcgtcgtc
aaggatggccgtttcggcccttacgttactgacggccagaccaacgcgaccctccgcaag
gacgattcggtcgaggacatcaccccggagcgggcccaggaattgctggccgagaagcgg
gctaaagggccagctaagaagagcccaactaagaagaagacgaccaggaagacaaccact
cgcaaaaccaccacgaagaagtcgacgaccaaggccacctcgaagtccgtcaaggtgacc
aaggcgaacgcgaaaacgtcgtcaggaagctga
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