Cutibacterium acnes subsp. defendens ATCC 11828: TIIST44_08015
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Entry
TIIST44_08015 CDS
T01972
Name
(GenBank) putative exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pad
Cutibacterium acnes subsp. defendens ATCC 11828
Pathway
pad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
TIIST44_08015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pad03400
]
TIIST44_08015
Enzymes [BR:
pad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
TIIST44_08015
DNA repair and recombination proteins [BR:
pad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TIIST44_08015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AER06067
LinkDB
All DBs
Position
complement(1700342..1703578)
Genome browser
AA seq
1078 aa
AA seq
DB search
MTTNTSFDITRPLPQGTVLLAASAGTGKTWTISAVCAKAIATGLVHMENLLLVTFNRSAA
RELRGRVYERLVNTRLLLAGAREPSDPCDWSIIRCGQAGLTRVESALDNFDRAVITTTHE
FASRMLVELGVLSDHDPSSVLMTDLAPLATEVSDDHYLAQYLDCDRPPSVREKRELSRDV
AVKYGEVPIFSKEDADTPVQDVLWALSVREDVRRRSKSRSVHTFDDLIGDLVKALRDPYR
GPLACATLANRFGLVMVDEFQDTDPLQWEILQRAFHGHSNLWLIGDPKQSIYAFRGADIH
AYQDAAQSASHVLHLDVNYRTDKPIVEAVNTLFSNAQLGHGISTELVTAHHQESRIKTAA
TDGPRYHWSQPFQIRCLQAPAGAQLNTAASDQFVTEDLVNQVIMMLEGGTVVQDGDGSRP
LRPNDIAILVRTRRRGAELATALSQVHQPAVFSGASPVWSSQAAEDLMTLLEALENTDER
LRTRLCLSDLIGATPADLAASDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLV
RLVSMAGGERYVTDLRQVAQKAHIAACEGRLTATATAAWIREQQQLAGDDEPRRLDSDQQ
AVIIMTVHEAKGLGFPVVLLPDITNGWAPKQSINGPIVWHDGQRRVLDISSQGTDRSIAI
ESHEEDERGENLRLLYVALTRARSAVRLWWSPCPRRHRWSAFQRLVEMDRTTGELGSGVA
GTDPGTLPWFNSGPIATVIAPANQKLLTRSVSAQPRACVVPRTLTRPLDTAFARTSYSGL
TANLHAAVSESMTNNLIDEPVDDESVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTAATDL
SSEVLSITRRALRMSPLPDVPPSELATSLEQVLHSDLGPLAPGMTLADFSPADRLAEMNF
ELAMTQHGRSTTMTDLASLLCDPSLVPPDDPISGYGEILAHIPNGDQALRGFLTGSIDAV
LRRPDGRHLVVDYKTNRIPGVHKLSPHMYDAHTMRAIMFSSHYPLQGLLYSAALHRFLAS
SLPGYDPATHLGPIGYLFVRGMADRPVPDGDMPDGVFTWHPRPELIEAISEQLGGLHD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaacacctcctttgacatcactcgaccactgccacaaggaaccgtcctgctg
gcagcaagtgccgggactggaaagacatggaccatctcggcggtgtgcgcgaaagctatc
gcgactggtctggttcacatggagaaccttctcctggtgaccttcaaccgatcagctgcc
cgcgagctgcgcggacgagtctacgaacgccttgtcaacacccgtttgctactagcaggc
gcccgagaaccctctgacccctgcgattggtcgattatccgatgtggccaggcaggactc
acacgagtggagtctgctctcgataacttcgacagggcggttatcaccaccacccatgag
ttcgcgtcccgaatgcttgtggagttgggagtgttatcagaccatgacccgtcctcagtg
ctgatgactgatcttgcccccctagcaaccgaggtatccgatgaccactacctggcacag
tatctcgactgtgaccggccgccctcagtgcgcgaaaaacgcgagctatctcgagatgtc
gcggtgaaatacggcgaggttccgatcttctccaaggaagatgcagacacgcctgtgcaa
gacgtgctgtgggccttatcagtacgagaagacgtccggagacgctccaaatcgcggtcg
gtgcatacctttgacgaccttattggcgatcttgtcaaggctcttcgtgacccataccgt
ggcccgttagcttgcgcaacgcttgctaatcggtttggactcgtcatggttgacgagttc
caagacactgatcctctgcaatgggagatactgcaacgagcctttcatggccacagcaac
ctttggctaatcggagatccaaaacaatcgatctacgccttccgaggggctgacatccac
gcttatcaagacgcggcccaatctgccagccatgtccttcatcttgacgtcaactaccga
actgataagcccattgtcgaggccgttaataccctctttagcaatgctcagttgggccac
ggtatttcaacggagttagtgacggcccatcatcaggaatcccgaattaagacagcggcc
accgatggaccgcgctaccactggtctcaacccttccagatccgctgcctccaagctcct
gccggcgcgcagctcaacacagcggcctccgatcagttcgttactgaagacctcgttaat
caggtaatcatgatgctcgagggcggaacggtcgttcaagatggcgacgggtcaaggcca
cttcgccccaacgacatcgcgatcctggtgcgaacacgtcgcaggggtgccgaacttgcg
acagcgctatcacaggtccatcagcctgcagtgttctctggtgcttcaccggtgtggtcg
tctcaggcggctgaagatcttatgaccttgctcgaggctctcgagaataccgatgaaagg
ctgcggaccaggttgtgcctgtctgacctcatcggtgcaacgccagccgatttggcagca
tccgactcgcgggtgcgctctgacctggcgattgacctggctcgctggtcgagtacctgg
acgatgacgggggtatggggaacggttgaggctgcccttcatcgccccggtgtgctggtg
cgtctggtaagcatggcaggtggtgagcgatacgtcaccgatctacgtcaggtggcacaa
aaggcgcatattgcggcctgtgaaggaagattgacggcgacggcaaccgcagcatggatc
cgcgagcaacagcaactggcaggcgacgacgaaccccgtcgccttgatagtgaccaacag
gctgtcatcatcatgaccgtccatgaggcaaagggtctgggattccccgtcgtgttattg
cctgacatcaccaatggatgggcgccgaagcagagcatcaatggtccgatcgtgtggcat
gacgggcaacggcgcgtgttggacatcagttcgcagggaaccgatcgttccatagcaatc
gagagccacgaagaggacgagcggggcgagaaccttcgcttgctgtacgtcgccctcacc
cgcgcccgatctgctgtacgactatggtggtccccttgtcctcggcgtcatcgatggtcc
gccttccaacgccttgtcgagatggaccgcacgacgggcgagctcggctcaggcgttgcc
gggaccgaccccggaactctcccctggttcaactccggaccgattgcgacagtaatagca
cctgctaaccagaaactccttacccggtcggtcagcgcccagcctcgtgcctgcgttgtc
cctaggacgctgacgcgaccactcgacaccgcgtttgcccgaacctcatattcaggactg
acggccaacctgcacgcagccgtatcggaatctatgactaacaacctcatcgacgaaccc
gttgacgacgagtccgtcgatgacacggcccccggtctgtgtgggttacccggaggaacc
tccttcggcaccctggttcacacggtccttgagtacatcgacaccgcggctaccgacctc
tccagcgaggtactctcaatcacccgcagagcccttcgaatgtcgcccttaccagacgtc
ccaccatctgaactcgccaccagtttggagcaggttcttcatagtgatctcggacccttg
gccccgggcatgaccttggcagatttttccccggcggatcgactggctgagatgaatttc
gaacttgccatgacccagcacggacgatcgaccaccatgacagacctagcgtccctcctc
tgcgatccgagtctggtgccacccgacgatcccatcagcggctacggcgaaatattggcc
catatccccaatggcgaccaggcgctacgcggctttctcacgggttcgatcgatgctgtc
ttgaggcgacccgatggtcgtcatctagttgtcgattacaagacgaaccgaattcctgga
gtccacaagctcagtcctcatatgtatgacgcacacacgatgagggccataatgttcagt
tctcactacccgctgcaaggattgttgtattcggcagccttgcatcgattcctggcatca
agtctgcctggatacgaccccgcaacccatcttggccccattggctacctttttgttcga
ggtatggctgatcgtccagtacccgacggtgacatgcctgacggagtttttacctggcat
ccgagacctgaactcattgaggcgatcagcgagcaattgggaggtctccatgactga
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